RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 OR5B12Q96R08 314 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 EBNA1BP2Q99848 306 aaKnown RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 C7orf50Q9BRJ6 194 aaKnown RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 MED10Q9BTT4 135 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 MED18Q9BUE0 208 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 PARD6GQ9BYG4 376 aaPredicted RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 TRABDQ9H4I3 376 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 FBXO44Q9H4M3 255 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 KIR3DX1Q9H7L2 352 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 CSNK1G1Q9HCP0 422 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 LYARQ9NX58 379 aaKnown RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 MS4A12Q9NXJ0 267 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 MYEF2Q9P2K5 600 aaKnown RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 MARCOQ9UEW3 520 aaPredicted RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 SLC22A13Q9Y226 551 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 SNX24Q9Y343 169 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 GOLT1BQ9Y3E0 138 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 A0A1W2PP64 1363 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 SCN4AP35499 1836 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 FANCAO15360 1455 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 DICER1Q9UPY3 1922 aaKnown RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 EIF4G3O43432 1585 aaKnown RBP2.44□□□□□ -2.02
CTR9-204ENST00000529355 PLXNC1O60486 1568 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 A0A1B0GUL6 1792 aa2.44□□□□□ -2.02
CTR9-204ENST00000529355 UHRF1BP1Q6BDS2 1440 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 YTHDC2Q9H6S0 1430 aaKnown RBP2.43□□□□□ -2.02
CTR9-204ENST00000529355 ANKRD50Q9ULJ7 1429 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 TRAPPC8Q9Y2L5 1435 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 UGGT2Q9NYU1 1516 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 LRRIQ1Q96JM4 1722 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 IGLV1-36A0A0B4J1U3 117 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 A0A1B0GUH1 482 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 A0A1B0GV90 55 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 ISPDA4D126 451 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 SIGLEC16A6NMB1 481 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 CENPXA8MT69 81 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 PRMT5O14744 637 aaPredicted RBP2.43□□□□□ -2.02
CTR9-204ENST00000529355 MRPS12O15235 138 aaKnown RBP2.43□□□□□ -2.02
CTR9-204ENST00000529355 FADS1O60427 444 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 ZMPSTE24O75844 475 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 TNFAIP8O95379 198 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 NDUFB10O96000 172 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 HLA-DPB1P04440 258 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 GIMD1P0DJR0 217 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 OR5H8P0DN80 308 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 ZNF7P17097 686 aaPredicted RBP2.43□□□□□ -2.02
CTR9-204ENST00000529355 CELP19835 753 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 TCN2P20062 427 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 DCKP27707 260 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 GTF2E2P29084 291 aaKnown RBP2.43□□□□□ -2.02
CTR9-204ENST00000529355 RPL35P42766 123 aaKnown RBP2.43□□□□□ -2.02
CTR9-204ENST00000529355 NSG1P42857 185 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 GABRA4P48169 554 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 RBP2P50120 134 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 DAOAP59103 153 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 NCALDP61601 193 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 CACNG7P62955 275 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 TFAMQ00059 246 aaKnown RBP2.43□□□□□ -2.02
CTR9-204ENST00000529355 IRF8Q02556 426 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 TNFRSF9Q07011 255 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 TWF1Q12792 350 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 SELENBP1Q13228 472 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 BIKQ13323 160 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 MED21Q13503 144 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 TFDP2Q14188 446 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 ZNF846Q147U1 533 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 PSG3Q16557 428 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 RNASE10Q5GAN6 216 aaKnown RBP2.43□□□□□ -2.02
CTR9-204ENST00000529355 N4BP2L1Q5TBK1 243 aaPredicted RBP2.43□□□□□ -2.02
CTR9-204ENST00000529355 RESP18Q5W5W9 173 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 RNASEKQ6P5S7 137 aaKnown RBP2.43□□□□□ -2.02
CTR9-204ENST00000529355 CLEC18BQ6UXF7 455 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 CD300LGQ6UXG3 332 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 SLC16A14Q7RTX9 510 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 PHF13Q86YI8 300 aaPredicted RBP2.43□□□□□ -2.02
CTR9-204ENST00000529355 C10orf107Q8IVU9 208 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 ZBTB8OSQ8IWT0 167 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 PRSS58Q8IYP2 241 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 PQLC3Q8N755 202 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 GATSQ8NAP1 163 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 NECAP1Q8NC96 275 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 OR9K2Q8NGE7 335 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 OR5B17Q8NGF7 314 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 OR4K15Q8NH41 348 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 OR52P1PQ8NH57 321 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 ZNF420Q8TAQ5 688 aaPredicted RBP2.43□□□□□ -2.02
CTR9-204ENST00000529355 SLC7A13Q8TCU3 470 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 GPX8Q8TED1 209 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 C1orf54Q8WWF1 131 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 C12orf43Q96C57 262 aaKnown RBP2.43□□□□□ -2.02
CTR9-204ENST00000529355 RMI2Q96E14 147 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 L3HYPDHQ96EM0 354 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 SMIM12Q96EX1 92 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 OR10C1Q96KK4 312 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 GLT1D1Q96MS3 346 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 RBBP8Q99708 897 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 UTP23Q9BRU9 249 aaKnown RBP2.43□□□□□ -2.02
CTR9-204ENST00000529355 C1orf50Q9BV19 199 aa2.43□□□□□ -2.02
CTR9-204ENST00000529355 UCK2Q9BZX2 261 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms