RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 ACOXLQ9NUZ1 547 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 RPS6KB2Q9UBS0 482 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 SLC7A8Q9UHI5 535 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF346Q9UL40 294 aaKnown RBP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.63□□□□□ -1.83
CSDE1-212ENST00000529046 ARFGEF3Q5TH69 2177 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 ALPK2Q86TB3 2170 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 SVEP1Q4LDE5 3571 aa3.63□□□□□ -1.83
CSDE1-212ENST00000529046 IGKV1D-42A0A075B6H8 117 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 PPIAL4EA0A075B759 164 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 PPIAL4CA0A0B4J2A2 164 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 TMEM120BA0PK00 339 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 C5orf58C9J3I9 102 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 PPIAL4DF5H284 164 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 J3QLI3 93 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 PLPP3O14495 311 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 CHP2O43745 196 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 TPST2O60704 377 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 SRSF10O75494 262 aaKnown RBP3.62□□□□□ -1.83
CSDE1-212ENST00000529046 RP2O75695 350 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 MFN2O95140 757 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 OR6A2O95222 327 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 MSMBP08118 114 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 ADRA2AP08913 450 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 SBK2P0C263 348 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 TSPAN19P0C672 248 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 OR8G3PP0DMU2 310 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 PPIAL4FP0DN26 164 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 B4GALT1P15291 398 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 HTR2AP28223 471 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 GRPRP30550 384 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 CRYBB2P43320 205 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 GPR6P46095 362 aaPredicted RBP3.62□□□□□ -1.83
CSDE1-212ENST00000529046 RIDAP52758 137 aaKnown RBP3.62□□□□□ -1.83
CSDE1-212ENST00000529046 GBX2P52951 348 aaPredicted RBP3.62□□□□□ -1.83
CSDE1-212ENST00000529046 RPL27P61353 136 aaKnown RBP3.62□□□□□ -1.83
CSDE1-212ENST00000529046 CDK6Q00534 326 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 MYBPC1Q00872 1141 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 COX10Q12887 443 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 SNTB2Q13425 540 aaKnown RBP3.62□□□□□ -1.83
CSDE1-212ENST00000529046 RIPK1Q13546 671 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 OR1Q1Q15612 314 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 PCK2Q16822 640 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 TRMT5Q32P41 509 aaKnown RBP3.62□□□□□ -1.83
CSDE1-212ENST00000529046 PHYHD1Q5SRE7 291 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 WDR25Q64LD2 544 aaPredicted RBP3.62□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF730Q6ZMV8 503 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 SH2D6Q7Z4S9 175 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 HMGN2P46Q86SG4 172 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 MDP1Q86V88 176 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 RANBP3LQ86VV4 465 aaPredicted RBP3.62□□□□□ -1.83
CSDE1-212ENST00000529046 FUNDC1Q8IVP5 155 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 MSRB3Q8IXL7 192 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 SVOPLQ8N434 492 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 CCDC197Q8NCU1 140 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 OR5J2Q8NH18 312 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 CLDND2Q8NHS1 167 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 SGMS2Q8NHU3 365 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 RASSF5Q8WWW0 418 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 TMEM54Q969K7 222 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 TLCD1Q96CP7 247 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 ZMYND19Q96E35 227 aaPredicted RBP3.62□□□□□ -1.83
CSDE1-212ENST00000529046 DNAJA3Q96EY1 480 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 SLC25A44Q96H78 314 aaPredicted RBP3.62□□□□□ -1.83
CSDE1-212ENST00000529046 NSMCE2Q96MF7 247 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 MRPL13Q9BYD1 178 aaKnown RBP3.62□□□□□ -1.83
CSDE1-212ENST00000529046 MRPL37Q9BZE1 423 aaKnown RBP3.62□□□□□ -1.83
CSDE1-212ENST00000529046 BCL2L14Q9BZR8 327 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 TMEM27Q9HBJ8 222 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 DYNLRB1Q9NP97 96 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 SLCO1B3Q9NPD5 702 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 TAS2R5Q9NYW4 299 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 SLC25A37Q9NYZ2 338 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 GLTPQ9NZD2 209 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 STX18Q9P2W9 335 aaKnown RBP3.62□□□□□ -1.83
CSDE1-212ENST00000529046 POFUT2Q9Y2G5 429 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 SH3GLB1Q9Y371 365 aa3.62□□□□□ -1.83
CSDE1-212ENST00000529046 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.61□□□□□ -1.832e-6■■■■□ 22.9
CSDE1-212ENST00000529046 HEATR1Q9H583 2144 aaKnown RBP3.61□□□□□ -1.83
CSDE1-212ENST00000529046 SH3PXD2BA1X283 911 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 TMEM89A2RUT3 159 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 LRP5LA4QPB2 252 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 TRAPPC13A5PLN9 417 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 GMNCA6NCL1 334 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF726A6NNF4 738 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 EVPLLA8MZ36 301 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 H3BSA7 217 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 M0R3G1 203 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 SSX5O60225 188 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 TPST1O60507 370 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 FARS2O95363 451 aaKnown RBP3.61□□□□□ -1.83
CSDE1-212ENST00000529046 FSTL3O95633 263 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 RAB36O95755 333 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 NPPAP01160 153 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 HLA-HP01893 362 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 ASAH2BP0C7U1 165 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 PGA4P0DJD7 388 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 PGA3P0DJD8 388 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 NR2C1P13056 603 aa3.61□□□□□ -1.83
CSDE1-212ENST00000529046 NQO1P15559 274 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms