RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 Q8NFD4 153 aa20.8■□□□□ 0.92
LDLRAD3-203ENST00000528989 Q8TCH9 128 aa20.8■□□□□ 0.92
LDLRAD3-203ENST00000528989 ATG5Q9H1Y0 275 aa20.8■□□□□ 0.92
LDLRAD3-203ENST00000528989 DYSFO75923 2080 aa20.8■□□□□ 0.92
LDLRAD3-203ENST00000528989 IGHV1-69-2A0A0G2JMI3 117 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 CFHR2P36980 270 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 GPR176Q14439 515 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 TAF9Q16594 264 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 IZUMO1Q8IYV9 350 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 FAM58AQ8N1B3 248 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 EMG1Q92979 244 aaKnown RBP20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 ERGIC1Q969X5 290 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 ABCG5Q9H222 651 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 HMG20AQ9NP66 347 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 RNF7Q9UBF6 113 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 ST3GAL6Q9Y274 331 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 ABCA12Q86UK0 2595 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 GEMIN2O14893 280 aaKnown RBP20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 TFF1P04155 84 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 GLRA1P23415 457 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 CAPZA1P52907 286 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 FGF12P61328 243 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 RPS27AP62979 156 aaKnown RBP20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 OR5T2Q8NGG2 359 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 OR51T1Q8NGJ9 327 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 YIPF5Q969M3 257 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 PTX4Q96A99 478 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 DIRAS2Q96HU8 199 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 HES4Q9HCC6 221 aa20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 FBXO9Q9UK97 447 aaPredicted RBP20.79■□□□□ 0.92
LDLRAD3-203ENST00000528989 APOA1P02647 267 aa20.78■□□□□ 0.92
LDLRAD3-203ENST00000528989 ACAA1P09110 424 aaPredicted RBP20.78■□□□□ 0.92
LDLRAD3-203ENST00000528989 RAB6AP20340 208 aa20.78■□□□□ 0.92
LDLRAD3-203ENST00000528989 SSTR2P30874 369 aa20.78■□□□□ 0.92
LDLRAD3-203ENST00000528989 VEGFCP49767 419 aa20.78■□□□□ 0.92
LDLRAD3-203ENST00000528989 CNIH2Q6PI25 160 aa20.78■□□□□ 0.92
LDLRAD3-203ENST00000528989 CDH24Q86UP0 819 aa20.78■□□□□ 0.92
LDLRAD3-203ENST00000528989 LRRC28Q86X40 367 aaPredicted RBP20.78■□□□□ 0.92
LDLRAD3-203ENST00000528989 Q96M66 194 aa20.78■□□□□ 0.92
LDLRAD3-203ENST00000528989 TMEM106BQ9NUM4 274 aa20.78■□□□□ 0.92
LDLRAD3-203ENST00000528989 ASH1LQ9NR48 2969 aaKnown RBP20.78■□□□□ 0.92
LDLRAD3-203ENST00000528989 VPS13CQ709C8 3753 aa20.78■□□□□ 0.92
LDLRAD3-203ENST00000528989 IGHV3OR15-7A0A075B7D8 119 aa20.77■□□□□ 0.92
LDLRAD3-203ENST00000528989 SRRM5B3KS81 715 aa20.77■□□□□ 0.92
LDLRAD3-203ENST00000528989 SOCS1O15524 211 aa20.77■□□□□ 0.92
LDLRAD3-203ENST00000528989 GABRR1P24046 479 aa20.77■□□□□ 0.92
LDLRAD3-203ENST00000528989 CDK2P24941 298 aa20.77■□□□□ 0.92
LDLRAD3-203ENST00000528989 OR4M1Q8NGD0 313 aa20.77■□□□□ 0.92
LDLRAD3-203ENST00000528989 POLQO75417 2590 aa20.77■□□□□ 0.92
LDLRAD3-203ENST00000528989 RBM11P57052 281 aaKnown RBP20.77■□□□□ 0.92
LDLRAD3-203ENST00000528989 ACP7Q6ZNF0 438 aa20.77■□□□□ 0.92
LDLRAD3-203ENST00000528989 OR11L1Q8NGX0 322 aa20.77■□□□□ 0.92
LDLRAD3-203ENST00000528989 OR10Z1Q8NGY1 313 aa20.77■□□□□ 0.92
LDLRAD3-203ENST00000528989 S100A16Q96FQ6 103 aaKnown RBP20.77■□□□□ 0.92
LDLRAD3-203ENST00000528989 EXTL2Q9UBQ6 330 aa20.77■□□□□ 0.92
LDLRAD3-203ENST00000528989 HECTD1Q9ULT8 2610 aa20.76■□□□□ 0.91
LDLRAD3-203ENST00000528989 RAB27BO00194 218 aa20.76■□□□□ 0.91
LDLRAD3-203ENST00000528989 CD80P33681 288 aa20.76■□□□□ 0.91
LDLRAD3-203ENST00000528989 LSAMPQ13449 338 aa20.76■□□□□ 0.91
LDLRAD3-203ENST00000528989 CCDC190Q86UF4 302 aa20.76■□□□□ 0.91
LDLRAD3-203ENST00000528989 Q8IYB0 196 aa20.76■□□□□ 0.91
LDLRAD3-203ENST00000528989 WDFY2Q96P53 400 aa20.76■□□□□ 0.91
LDLRAD3-203ENST00000528989 ZMAT3Q9HA38 289 aaKnown RBP20.76■□□□□ 0.91
LDLRAD3-203ENST00000528989 PCDHB16Q9NRJ7 776 aa20.76■□□□□ 0.91
LDLRAD3-203ENST00000528989 APCP25054 2843 aa20.76■□□□□ 0.91
LDLRAD3-203ENST00000528989 TMEM178BH3BS89 294 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 DAOP14920 347 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 PITPNBP48739 271 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 CEBPDP49716 269 aaPredicted RBP20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 HFEQ30201 348 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 SIGIRRQ6IA17 410 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 BRICD5Q6PL45 260 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 FAM89BQ8N5H3 189 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 DEFB108BQ8NET1 73 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 NEU4Q8WWR8 484 aaPredicted RBP20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 MRPS24Q96EL2 167 aaKnown RBP20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 CMTM3Q96MX0 182 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 TM2D1Q9BX74 207 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 F12P00748 615 aaPredicted RBP20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 IRF2P14316 349 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 TMEM50BP56557 158 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 SCN1BQ07699 218 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 RAB40AQ8WXH6 277 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 URM1Q9BTM9 101 aaKnown RBP20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 PLEKHA6Q9Y2H5 1048 aa20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 MRPS7Q9Y2R9 242 aaKnown RBP20.75■□□□□ 0.91
LDLRAD3-203ENST00000528989 CSMD1Q96PZ7 3565 aa20.74■□□□□ 0.91
LDLRAD3-203ENST00000528989 METTL21EPA6NDL7 271 aa20.74■□□□□ 0.91
LDLRAD3-203ENST00000528989 LRRC30A6NM36 301 aa20.74■□□□□ 0.91
LDLRAD3-203ENST00000528989 PTHLHP12272 177 aa20.74■□□□□ 0.91
LDLRAD3-203ENST00000528989 RANBP1P43487 201 aa20.74■□□□□ 0.91
LDLRAD3-203ENST00000528989 OR14J1Q9UGF5 321 aa20.74■□□□□ 0.91
LDLRAD3-203ENST00000528989 ELF5Q9UKW6 265 aaPredicted RBP20.74■□□□□ 0.91
LDLRAD3-203ENST00000528989 NPTNQ9Y639 398 aa20.74■□□□□ 0.91
LDLRAD3-203ENST00000528989 RFPL4AA6NLU0 287 aa20.73■□□□□ 0.91
LDLRAD3-203ENST00000528989 RFPL4AL1F8VTS6 287 aa20.73■□□□□ 0.91
LDLRAD3-203ENST00000528989 RP2O75695 350 aa20.73■□□□□ 0.91
LDLRAD3-203ENST00000528989 OR7C1O76099 320 aaPredicted RBP20.73■□□□□ 0.91
LDLRAD3-203ENST00000528989 ZNF181Q2M3W8 571 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms