RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 SFT2D2O95562 160 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 PLATP00750 562 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 SFTPBP07988 381 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 RAC2P15153 192 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 PPP3CBP16298 524 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 HAAOP46952 286 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 HLXQ14774 488 aaPredicted RBP12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 KRTCAP3Q53RY4 240 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 TMEM65Q6PI78 240 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 TEX261Q6UWH6 196 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 DHRS11Q6UWP2 260 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 C3P1Q6ZMU1 363 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 Q6ZS49 121 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 CALHM1Q8IU99 346 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 FAM169BQ8N8A8 192 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 CNEP1R1Q8N9A8 125 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 C9orf106Q8NAJ2 232 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 OR8H1Q8NGG4 311 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 MBD3L2Q8NHZ7 208 aaPredicted RBP12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 COQ8AQ8NI60 647 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 GTF3AQ92664 365 aaKnown RBP12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 ZNF286AQ9HBT8 521 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 C14orf166Q9Y224 244 aaKnown RBP12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 U3KQ87 197 aa12.7□□□□□ -0.38
ECHDC1-220ENST00000528402 WDR1O75083 606 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 SLC25A4P12235 298 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 AKR1C4P17516 323 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 GPM6AP51674 278 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 IL24Q13007 206 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 C2orf68Q2NKX9 166 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 AADACL3Q5VUY0 350 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 BEND4Q6ZU67 534 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 RTN4RL2Q86UN3 420 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 OR13G1Q8NGZ3 307 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 HPSE2Q8WWQ2 592 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 TAAR6Q96RI8 345 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 MICU1Q9BPX6 476 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 C5orf66Q9H5L9 145 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 C12orf4Q9NQ89 552 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 SLC23A1Q9UHI7 598 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 ZNF230Q9UIE0 474 aaPredicted RBP12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 PROCRQ9UNN8 238 aa12.69□□□□□ -0.38
ECHDC1-220ENST00000528402 CNOT1A5YKK6 2376 aaKnown RBP12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 DOCK7Q96N67 2140 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 WDFY3Q8IZQ1 3526 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 DBX1A6NMT0 343 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 MKRN2OSH3BPM6 223 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 TSC22D2O75157 780 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 SIX6O95475 246 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 CTSDP07339 412 aaPredicted RBP12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 FCGR3AP08637 254 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 RPA2P15927 270 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 VAMP1P23763 118 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 NPY4RP50391 375 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 PPP1CBP62140 327 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 IL13RA2Q14627 380 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 OPCMLQ14982 345 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 PIGYQ3MUY2 71 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 LY6G6FQ5SQ64 297 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 Q8IYB0 196 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 OR5M9Q8NGP3 310 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 SLX1AQ9BQ83 275 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 SULT4A1Q9BR01 284 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 PDCD10Q9BUL8 212 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 RTL8AQ9BWD3 113 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 HEXA-AS1Q9H8Q6 139 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 RAB18Q9NP72 206 aa12.68□□□□□ -0.38
ECHDC1-220ENST00000528402 TUBAL3A6NHL2 446 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 SMPD2O60906 423 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 IGKV3-15P01624 115 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 OR5H8P0DN80 308 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 CALCRP30988 508 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 S100A11P31949 105 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 UCP2P55851 309 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 PRSS12P56730 875 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 DCAF12L2Q5VW00 463 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 ZNF585AQ6P3V2 769 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 GSG1LQ6UXU4 331 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 C17orf107Q6ZR85 190 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 RFPL4BQ6ZWI9 263 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 ASCL5Q7RTU5 278 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 SLC7A5P1Q8MH63 180 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 GCNT2Q8N0V5 402 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 ADAD2Q8NCV1 583 aaKnown RBP12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 ZNF680Q8NEM1 530 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 VRK1Q99986 396 aaPredicted RBP12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 RTBDNQ9BSG5 229 aaPredicted RBP12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 ZNF442Q9H7R0 627 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 FN3KRPQ9HA64 309 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 SSUH2Q9Y2M2 353 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 AMDHD2Q9Y303 409 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 WDFY4Q6ZS81 3184 aa12.67□□□□□ -0.38
ECHDC1-220ENST00000528402 A0A0C4DFX4 3053 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 A0A0D9SG52 128 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 OR5H14A6NHG9 310 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 IQCF6A8MYZ5 107 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 J3QT63 122 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 LYZL6O75951 148 aa12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 OR7C1O76099 320 aaPredicted RBP12.66□□□□□ -0.38
ECHDC1-220ENST00000528402 ACAA1P09110 424 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms