RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 NPSR1Q6W5P4 371 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 FBXW12Q6X9E4 464 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TPGS1Q6ZTW0 290 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 USP50Q70EL3 339 aaPredicted RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 HIST2H3AQ71DI3 136 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 SLC35D2Q76EJ3 337 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 SSX7Q7RTT5 188 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 MRPL21Q7Z2W9 205 aaKnown RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 MDP1Q86V88 176 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 SLC13A5Q86YT5 568 aaPredicted RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 WDFY1Q8IWB7 410 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TMEM256Q8N2U0 113 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ZFP41Q8N8Y5 198 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 WDR31Q8NA23 367 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 GATSQ8NAP1 163 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TTLQ8NG68 377 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 OR6K6Q8NGW6 343 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 OR10Z1Q8NGY1 313 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 OR6K2Q8NGY2 324 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 OR2T29Q8NH02 315 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 OR52E5Q8NH55 327 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 MFSD8Q8NHS3 518 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 GRPEL2Q8TAA5 225 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 LINC01560Q8TB33 94 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 DYNC2LI1Q8TCX1 351 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 RNASEH2CQ8TDP1 164 aaKnown RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 DOK4Q8TEW6 326 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TMEM239Q8WW34 195 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 OR8D1Q8WZ84 308 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TFGQ92734 400 aaPredicted RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CDS1Q92903 461 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TNFRSF14Q92956 283 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 NAT6Q93015 286 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CIDECQ96AQ7 238 aaPredicted RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 RPEQ96AT9 228 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 PPWD1Q96BP3 646 aaKnown RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 SGTBQ96EQ0 304 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 CENPNQ96H22 339 aaPredicted RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ANKRD36BP1Q96IX9 119 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ADTRPQ96IZ2 230 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 RNF145Q96MT1 663 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF75AQ96N20 296 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 SERPINB11Q96P15 392 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 OR2M4Q96R27 311 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 VAT1Q99536 393 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF251Q9BRH9 671 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ANAPC13Q9BS18 74 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TAPBPLQ9BX59 468 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 SUCNR1Q9BXA5 334 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 UGT2B28Q9BY64 529 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ULBP3Q9BZM4 244 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ULBP1Q9BZM6 244 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 RAB1BQ9H0U4 201 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 METTL9Q9H1A3 318 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 PORCNQ9H237 461 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 OR51E2Q9H255 320 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 FBXL15Q9H469 300 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 PLEKHA1Q9HB21 404 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ENY2Q9NPA8 101 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ACP6Q9NPH0 428 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TMEM9BQ9NQ34 198 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 OR2S2Q9NQN1 319 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF302Q9NR11 478 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 NRBP2Q9NSY0 501 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TMEM100Q9NV29 134 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 PARVAQ9NVD7 372 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 TAS2R13Q9NYV9 303 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 MTFP1Q9UDX5 166 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF391Q9UJN7 358 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 NXT1Q9UKK6 140 aaKnown RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 PSG8Q9UQ74 426 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ANGPT4Q9Y264 503 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 AP3M1Q9Y2T2 418 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 LSM5Q9Y4Y9 91 aaKnown RBP0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ENPP4Q9Y6X5 453 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ELP1O95163 1332 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 ABCB11O95342 1321 aa0.82□□□□□ -2.28
ECHDC1-219ENST00000526299 NPHP4O75161 1426 aaPredicted RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 A0A0U1RQV1 116 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 A0A1B0GVX0 72 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 A0A1W2PRG6 482 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 SLC22A20A6NK97 555 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 GABRR3A8MPY1 467 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF850A8MQ14 1090 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 C2orf74A8MZ97 194 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 E5RI56 91 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 LRRN3E7EW58 273 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 M0R036 132 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 TNFRSF11BO00300 401 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 CCRL2O00421 344 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 NME4O00746 187 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 PRMT5O14744 637 aaPredicted RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 UBDO15205 165 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 SLC16A4O15374 487 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 ATP8B1O43520 1251 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 SGCEO43556 437 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 TRAPPC3O43617 180 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 GATCO43716 136 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 STX10O60499 249 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 PLIN3O60664 434 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms