RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 MFGE8Q08431 387 aaPredicted RBP2.45□□□□□ -2.02
CSDE1-208ENST00000524652 TNK1Q13470 666 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 AQP6Q13520 282 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 EIF2B1Q14232 305 aaKnown RBP2.45□□□□□ -2.02
CSDE1-208ENST00000524652 GSG1Q2KHT4 349 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 SNAI3Q3KNW1 292 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 ALKBH6Q3KRA9 238 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 SLC36A2Q495M3 483 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 CDONQ4KMG0 1287 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 TP53I3Q53FA7 332 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 TEX30Q5JUR7 227 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 SLC35D3Q5M8T2 416 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 ELFN2Q5R3F8 820 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF684Q5T5D7 378 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 OR2G6Q5TZ20 316 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 TTC23Q5W5X9 447 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 KRT80Q6KB66 452 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 RFPL4BQ6ZWI9 263 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 SLC16A9Q7RTY1 509 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 HDDC2Q7Z4H3 204 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 ABHD12BQ7Z5M8 362 aaPredicted RBP2.45□□□□□ -2.02
CSDE1-208ENST00000524652 GID4Q8IVV7 300 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 SLC35F2Q8IXU6 374 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 C8orf59Q8N0T1 100 aaPredicted RBP2.45□□□□□ -2.02
CSDE1-208ENST00000524652 C17orf78Q8N4C9 275 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 GBGT1Q8N5D6 347 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF555Q8NEP9 628 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 OR6N2Q8NGY6 317 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 OTOSQ8NHW6 89 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 RNF133Q8WVZ7 376 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 TRUB1Q8WWH5 349 aaKnown RBP2.45□□□□□ -2.02
CSDE1-208ENST00000524652 HSD17B8Q92506 261 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 GTF3AQ92664 365 aaKnown RBP2.45□□□□□ -2.02
CSDE1-208ENST00000524652 SLAMF6Q96DU3 332 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 PIK3IP1Q96FE7 263 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 PLEKHA8Q96JA3 519 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 CNBD2Q96M20 576 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 DACH2Q96NX9 599 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 SLC38A2Q96QD8 506 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 INTS14Q96SY0 518 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 CNN2Q99439 309 aaKnown RBP2.45□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF184Q99676 751 aaPredicted RBP2.45□□□□□ -2.02
CSDE1-208ENST00000524652 VGLL1Q99990 258 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 APOL4Q9BPW4 351 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 MED18Q9BUE0 208 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 OR51B6Q9H340 312 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 PLEKHF2Q9H8W4 249 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 ISG20L2Q9H9L3 353 aaKnown RBP2.45□□□□□ -2.02
CSDE1-208ENST00000524652 B3GAT2Q9NPZ5 323 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 C8orf4Q9NR00 106 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 DDX28Q9NUL7 540 aaKnown RBP2.45□□□□□ -2.02
CSDE1-208ENST00000524652 IMPAD1Q9NX62 359 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 HAO2Q9NYQ3 351 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 PLEK2Q9NYT0 353 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 WARS2Q9UGM6 360 aaKnown RBP2.45□□□□□ -2.02
CSDE1-208ENST00000524652 CLEC2DQ9UHP7 191 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 ENOPH1Q9UHY7 261 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 MRM2Q9UI43 246 aaKnown RBP2.45□□□□□ -2.02
CSDE1-208ENST00000524652 PSORS1C1Q9UIG5 152 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 RAB26Q9ULW5 256 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 FZR1Q9UM11 496 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 MOKQ9UQ07 419 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 GRIP1Q9Y3R0 1128 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 PYGO1Q9Y3Y4 419 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 ORC6Q9Y5N6 252 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 HSPE1-MOB4S4R3N1 261 aa2.45□□□□□ -2.02
CSDE1-208ENST00000524652 KIAA2026Q5HYC2 2103 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 MED13LQ71F56 2210 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 A0A1W2PQL4 384 aaPredicted RBP2.44□□□□□ -2.02
CSDE1-208ENST00000524652 C5orf49A4QMS7 147 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 TRIM64A6NGJ6 449 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF878C9JN71 531 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 E9PI62 339 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 F5H5K5 113 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 H3BSH0 61 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 M0R135 149 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 FARS2O95363 451 aaKnown RBP2.44□□□□□ -2.02
CSDE1-208ENST00000524652 RAB36O95755 333 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 PTHP01270 115 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 IGLV3-1P01715 115 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 CD8AP01732 235 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 MT-ND2P03891 347 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 CDK1P06493 297 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 LIPFP07098 398 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 LYNP07948 512 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 SOD3P08294 240 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 COX5BP10606 129 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 PIPP12273 146 aaPredicted RBP2.44□□□□□ -2.02
CSDE1-208ENST00000524652 NR2C1P13056 603 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF823P16415 610 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 PCMT1P22061 227 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 CCNOP22674 350 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 CRHBPP24387 322 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 STOMP27105 288 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 ARR3P36575 388 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 MPV17P39210 176 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 PSMB10P40306 273 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 MAGEB1P43366 347 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 KIR3DL2P43630 455 aa2.44□□□□□ -2.02
CSDE1-208ENST00000524652 MAP2K4P45985 399 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms