RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 MARS2Q96GW9 593 aaKnown RBP8.55□□□□□ -1.04
VPS13B-212ENST00000524330 ST6GALNAC5Q9BVH7 336 aa8.55□□□□□ -1.04
VPS13B-212ENST00000524330 PPA2Q9H2U2 334 aa8.55□□□□□ -1.04
VPS13B-212ENST00000524330 OR51I2Q9H344 312 aa8.55□□□□□ -1.04
VPS13B-212ENST00000524330 GHITMQ9H3K2 345 aa8.55□□□□□ -1.04
VPS13B-212ENST00000524330 POFUT1Q9H488 388 aa8.55□□□□□ -1.04
VPS13B-212ENST00000524330 CHMP1AQ9HD42 196 aaPredicted RBP8.55□□□□□ -1.04
VPS13B-212ENST00000524330 COQ3Q9NZJ6 369 aa8.55□□□□□ -1.04
VPS13B-212ENST00000524330 Q9UFV3 132 aa8.55□□□□□ -1.04
VPS13B-212ENST00000524330 MGAT4AQ9UM21 535 aa8.55□□□□□ -1.04
VPS13B-212ENST00000524330 KCNK7Q9Y2U2 307 aa8.55□□□□□ -1.04
VPS13B-212ENST00000524330 BOLA2-SMG1P6H3BVE0 249 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 M0QYG6 137 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 PRKACAP17612 351 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 BCL3P20749 454 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 TNFSF4P23510 183 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 HRH1P35367 487 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 MDH2P40926 338 aaKnown RBP8.54□□□□□ -1.04
VPS13B-212ENST00000524330 GLP1RP43220 463 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 PRSS12P56730 875 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 PSG7Q13046 419 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 SURF2Q15527 256 aaPredicted RBP8.54□□□□□ -1.04
VPS13B-212ENST00000524330 SRSF7Q16629 238 aaKnown RBP eCLIP8.54□□□□□ -1.04
VPS13B-212ENST00000524330 C4orf46Q504U0 113 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 DMRTC1Q5HYR2 192 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 FAHD2BQ6P2I3 314 aaPredicted RBP8.54□□□□□ -1.04
VPS13B-212ENST00000524330 CRIP3Q6Q6R5 217 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 RNF144BQ7Z419 303 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 PEG10Q86TG7 708 aaKnown RBP8.54□□□□□ -1.04
VPS13B-212ENST00000524330 CALHM1Q8IU99 346 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 OR5AP2Q8NGF4 316 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 FAHD2AQ96GK7 314 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 TRAF4Q9BUZ4 470 aaPredicted RBP8.54□□□□□ -1.04
VPS13B-212ENST00000524330 TINAGL1Q9GZM7 467 aaPredicted RBP8.54□□□□□ -1.04
VPS13B-212ENST00000524330 RANBP3Q9H6Z4 567 aaPredicted RBP8.54□□□□□ -1.04
VPS13B-212ENST00000524330 C12orf4Q9NQ89 552 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 NECAP2Q9NVZ3 263 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 ZNF69Q9UC07 566 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 SH3BGRL2Q9UJC5 107 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 TINAGQ9UJW2 476 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 ZNF222Q9UK12 451 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 MYO15AQ9UKN7 3530 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 A0A0C4DFX4 3053 aa8.54□□□□□ -1.04
VPS13B-212ENST00000524330 DMDP11532 3685 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 IGKV1-12A0A0C4DH73 117 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 KIR2DS1A0A191URI9 304 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 PYCARD-AS1I3L0S3 204 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 SH2D1BO14796 132 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 GEMIN2O14893 280 aaKnown RBP8.53□□□□□ -1.04
VPS13B-212ENST00000524330 SSX5O60225 188 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 IGKV1D-12P01611 117 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 PMP2P02689 132 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 CSN2P05814 226 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 SFTPBP07988 381 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 CTXN2P0C2S0 81 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 GSTT2P0CG29 244 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 ERP29P30040 261 aaKnown RBP8.53□□□□□ -1.04
VPS13B-212ENST00000524330 CA7P43166 264 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 KIR2DS4P43632 304 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 ASCL1P50553 236 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 FABP6P51161 128 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 KLF3P57682 345 aaPredicted RBP8.53□□□□□ -1.04
VPS13B-212ENST00000524330 CD83Q01151 205 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 IKZF1Q13422 519 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 KIR2DS1Q14954 304 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 NKPD1Q17RQ9 610 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 FAM76BQ5HYJ3 339 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 TMEM255AQ5JRV8 349 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 SPIN3Q5JUX0 258 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 LIN54Q6MZP7 749 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 ALKBH2Q6NS38 261 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 FAAP20Q6NZ36 180 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 C6orf201Q7Z4U5 140 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 SPICQ8N5J4 248 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 GVQW1Q8N7I0 195 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 OR4S1Q8NGB4 309 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 OR10AD1Q8NGE0 317 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 TERB2Q8NHR7 220 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 ZFAND1Q8TCF1 268 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 GTF3AQ92664 365 aaKnown RBP8.53□□□□□ -1.04
VPS13B-212ENST00000524330 FBXW5Q969U6 566 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 RADILQ96JH8 1075 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 DHRS9Q9BPW9 319 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 EHFQ9NZC4 300 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 JKAMPQ9P055 326 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 AK3Q9UIJ7 227 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 C14orf166Q9Y224 244 aaKnown RBP8.53□□□□□ -1.04
VPS13B-212ENST00000524330 MEMO1Q9Y316 297 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 CUL9Q8IWT3 2517 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 ACACAQ13085 2346 aa8.53□□□□□ -1.04
VPS13B-212ENST00000524330 A0A0B4J293 547 aa8.52□□□□□ -1.05
VPS13B-212ENST00000524330 WIPF3A6NGB9 483 aa8.52□□□□□ -1.05
VPS13B-212ENST00000524330 A6NLC8 198 aa8.52□□□□□ -1.05
VPS13B-212ENST00000524330 C1QTNF9BB2RNN3 333 aa8.52□□□□□ -1.05
VPS13B-212ENST00000524330 DEGS1O15121 323 aa8.52□□□□□ -1.05
VPS13B-212ENST00000524330 NOS1APO75052 506 aaPredicted RBP8.52□□□□□ -1.05
VPS13B-212ENST00000524330 NXPH2O95156 264 aa8.52□□□□□ -1.05
VPS13B-212ENST00000524330 SLC34A2O95436 690 aa8.52□□□□□ -1.05
VPS13B-212ENST00000524330 IGHV3-13P01766 116 aa8.52□□□□□ -1.05
VPS13B-212ENST00000524330 GRPP07492 148 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms