RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 LHBP01229 141 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 TFF1P04155 84 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 GLRA1P23415 457 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 CD80P33681 288 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 SCAND1P57086 179 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 FGF12P61328 243 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 UBE2NLQ5JXB2 153 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 SFRP4Q6FHJ7 346 aaPredicted RBP11.26□□□□□ -0.61
CLK4-210ENST00000522136 ELP2Q6IA86 826 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 RTN4RL2Q86UN3 420 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 IZUMO1Q8IYV9 350 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 Q8NFD4 153 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 OR5T2Q8NGG2 359 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 OR11L1Q8NGX0 322 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 ERGIC1Q969X5 290 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 HMG20AQ9NP66 347 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 ST3GAL6Q9Y274 331 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 PEX16Q9Y5Y5 336 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 FBN2P35556 2912 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 CELSR2Q9HCU4 2923 aa11.26□□□□□ -0.61
CLK4-210ENST00000522136 CENPEQ02224 2701 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 IGHV3OR15-7A0A075B7D8 119 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 SRRM5B3KS81 715 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 ACAA1P09110 424 aaPredicted RBP11.25□□□□□ -0.61
CLK4-210ENST00000522136 RAB6AP20340 208 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 S100A5P33763 92 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 CAPZA1P52907 286 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 RPS27AP62979 156 aaKnown RBP11.25□□□□□ -0.61
CLK4-210ENST00000522136 TAF9Q16594 264 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 MOGAT2Q3SYC2 334 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 ACP7Q6ZNF0 438 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 OR4M1Q8NGD0 313 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 OR51T1Q8NGJ9 327 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 OR10Z1Q8NGY1 313 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 NEU4Q8WWR8 484 aaPredicted RBP11.25□□□□□ -0.61
CLK4-210ENST00000522136 Q96M66 194 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 ABCG5Q9H222 651 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 HES4Q9HCC6 221 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 TMEM106BQ9NUM4 274 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 ARID1AO14497 2285 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 GEMIN2O14893 280 aaKnown RBP11.25□□□□□ -0.61
CLK4-210ENST00000522136 SOCS1O15524 211 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 APOA1P02647 267 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 IRF2P14316 349 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 GABRR1P24046 479 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 CEBPDP49716 269 aaPredicted RBP11.25□□□□□ -0.61
CLK4-210ENST00000522136 VEGFCP49767 419 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 RBM11P57052 281 aaKnown RBP11.25□□□□□ -0.61
CLK4-210ENST00000522136 CNIH2Q6PI25 160 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 CDH24Q86UP0 819 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 DEFB108BQ8NET1 73 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 PTX4Q96A99 478 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 DIRAS2Q96HU8 199 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 PLEKHA6Q9Y2H5 1048 aa11.25□□□□□ -0.61
CLK4-210ENST00000522136 TMEM178BH3BS89 294 aa11.24□□□□□ -0.61
CLK4-210ENST00000522136 DAOP14920 347 aa11.24□□□□□ -0.61
CLK4-210ENST00000522136 CDK2P24941 298 aa11.24□□□□□ -0.61
CLK4-210ENST00000522136 RANBP1P43487 201 aa11.24□□□□□ -0.61
CLK4-210ENST00000522136 SCN1BQ07699 218 aa11.24□□□□□ -0.61
CLK4-210ENST00000522136 HFEQ30201 348 aa11.24□□□□□ -0.61
CLK4-210ENST00000522136 LRRC28Q86X40 367 aaPredicted RBP11.24□□□□□ -0.61
CLK4-210ENST00000522136 Q8IYB0 196 aa11.24□□□□□ -0.61
CLK4-210ENST00000522136 TM2D1Q9BX74 207 aa11.24□□□□□ -0.61
CLK4-210ENST00000522136 PCDHB16Q9NRJ7 776 aa11.24□□□□□ -0.61
CLK4-210ENST00000522136 EXTL2Q9UBQ6 330 aa11.24□□□□□ -0.61
CLK4-210ENST00000522136 LRRC30A6NM36 301 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 RP2O75695 350 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 F12P00748 615 aaPredicted RBP11.23□□□□□ -0.61
CLK4-210ENST00000522136 PITPNBP48739 271 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 ZNF181Q2M3W8 571 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 SIGIRRQ6IA17 410 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 BRICD5Q6PL45 260 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 CCDC190Q86UF4 302 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 RAB40AQ8WXH6 277 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 RDH5Q92781 318 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 HPS1Q92902 700 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 MRPS24Q96EL2 167 aaKnown RBP11.23□□□□□ -0.61
CLK4-210ENST00000522136 S100A16Q96FQ6 103 aaKnown RBP11.23□□□□□ -0.61
CLK4-210ENST00000522136 WDFY2Q96P53 400 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 URM1Q9BTM9 101 aaKnown RBP11.23□□□□□ -0.61
CLK4-210ENST00000522136 CXorf56Q9H5V9 222 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 DNAJB11Q9UBS4 358 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 OR14J1Q9UGF5 321 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 METTL21EPA6NDL7 271 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 RFPL4AA6NLU0 287 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 RFPL4AL1F8VTS6 287 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 RAB27BO00194 218 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 IGHV4-39P01824 125 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 EFNA4P52798 201 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 TMEM50BP56557 158 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 LSAMPQ13449 338 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 FAM89BQ8N5H3 189 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 CMTM3Q96MX0 182 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 ZMAT3Q9HA38 289 aaKnown RBP11.23□□□□□ -0.61
CLK4-210ENST00000522136 RHOFQ9HBH0 211 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 ADAM30Q9UKF2 790 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 MRPS7Q9Y2R9 242 aaKnown RBP11.23□□□□□ -0.61
CLK4-210ENST00000522136 NPTNQ9Y639 398 aa11.23□□□□□ -0.61
CLK4-210ENST00000522136 ABCA12Q86UK0 2595 aa11.22□□□□□ -0.61
CLK4-210ENST00000522136 OR7C1O76099 320 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms