RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ZNF75AQ96N20 296 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 FOXN4Q96NZ1 517 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 TEAD3Q99594 435 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 SH3GL3Q99963 347 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 APOL4Q9BPW4 351 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF416Q9BWM5 594 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 HCAR1Q9BXC0 346 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 C1QTNF6Q9BXI9 259 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 OR2H1Q9GZK4 316 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 RNF121Q9H920 327 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 MED20Q9H944 212 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 MARCH7Q9H992 704 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 CCNB1IP1Q9NPC3 277 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 RPS10P5Q9NQ39 176 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 MRPL22Q9NWU5 206 aaKnown RBP2.63□□□□□ -1.99
VPS13B-209ENST00000521559 CLN6Q9NWW5 311 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 WARS2Q9UGM6 360 aaKnown RBP2.63□□□□□ -1.99
VPS13B-209ENST00000521559 FBXL3Q9UKT7 428 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 PPP1R3CQ9UQK1 317 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 WDR83OSQ9Y284 106 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 HSPE1-MOB4S4R3N1 261 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 NINQ8N4C6 2090 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 SPTA1P02549 2419 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 COL6A6A6NMZ7 2263 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 POLEQ07864 2286 aa2.63□□□□□ -1.99
VPS13B-209ENST00000521559 CELSR3Q9NYQ7 3312 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 EXPH5Q8NEV8 1989 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 TLN1Q9Y490 2541 aaKnown RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 SHANK1Q9Y566 2161 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 IGHV1-18A0A0C4DH31 117 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 IQCMA0A1B0GVH7 501 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 C5orf52A6NGY3 159 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 SNTNA6NMZ2 147 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 C15orf61A6NNL5 157 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 M0R129 80 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 M0R1B8 84 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 RER1O15258 196 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 SGCEO43556 437 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 SELENOFO60613 162 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ENTPD6O75354 484 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 WBP4O75554 376 aaKnown RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 CTAG2O75638 210 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 DUS4LO95620 317 aaKnown RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 RAB36O95755 333 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 CLIC3O95833 236 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 IGKV3-15P01624 115 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 CECR9P0C854 216 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 SPP1P10451 314 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 COX5BP10606 129 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 SLC2A2P11168 524 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF35P13682 527 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF14P17017 642 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF32P17041 273 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ALOX5APP20292 161 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 STOMP27105 288 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 LOXP28300 417 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ATP6V1E1P36543 226 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 NKX2-1P43699 371 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 GDI2P50395 445 aaKnown RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 IDH3GP51553 393 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 AQP4P55087 323 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 CSNK2BP67870 215 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 IL5RAQ01344 420 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 NAAAQ02083 359 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ECH1Q13011 328 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 AQP6Q13520 282 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 GGTLC2Q14390 218 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 MAD2L1BPQ15013 274 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 RAB35Q15286 201 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 SNCBQ16143 134 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 MEP1BQ16820 701 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 CCDC92Q53HC0 331 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 PABPC1L2AQ5JQF8 200 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 C6orf52Q5T4I8 152 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF691Q5VV52 312 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 OTPQ5XKR4 325 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF774Q6NX45 483 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 IZUMO2Q6UXV1 221 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 B3GLCTQ6Y288 498 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 TMEM182Q6ZP80 229 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ERI1Q8IV48 349 aaKnown RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF584Q8IVC4 421 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ENTHD1Q8IYW4 607 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 NHLRC2Q8NBF2 726 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 SLC30A7Q8NEW0 376 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 OR4F15Q8NGB8 312 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 OR6K6Q8NGW6 343 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 OR6N2Q8NGY6 317 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 OR1F12Q8NHA8 337 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 AKR7LQ8NHP1 331 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 OTOSQ8NHW6 89 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 THEM6Q8WUY1 208 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 APH1BQ8WW43 257 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 CYGBQ8WWM9 190 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ASB17Q8WXJ9 295 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ST6GALNAC6Q969X2 333 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 ZMYND19Q96E35 227 aaPredicted RBP2.62□□□□□ -1.99
VPS13B-209ENST00000521559 C14orf79Q96F83 325 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 COQ7Q99807 217 aa2.62□□□□□ -1.99
VPS13B-209ENST00000521559 KCNS3Q9BQ31 491 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms