RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 GPER1Q99527 375 aa11.46□□□□□ -0.57
CTNNA1-226ENST00000521368 IGKV1-12A0A0C4DH73 117 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 A0A1W2PPK0 400 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 RFPL4AA6NLU0 287 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 RFPL4AL1F8VTS6 287 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 F8VVB4 439 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 F8VWA3 439 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 CCRL2O00421 344 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 NDUFB3O43676 98 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 ANGPTL7O43827 346 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 ARL6IP5O75915 188 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 RGS9O75916 674 aaPredicted RBP11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 ECDO95905 644 aaPredicted RBP11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 IGKV1D-12P01611 117 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 TMEM225BP0DP42 221 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 BCL3P20749 454 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 GALP22466 123 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 PRDX2P32119 198 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 PTGFRP43088 359 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 NPBWR2P48146 333 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 CAV3P56539 151 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 INSL4Q14641 139 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 ZNF146Q15072 292 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 HSD17B12Q53GQ0 312 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 LRRC10Q5BKY1 277 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 SPIN3Q5JUX0 258 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 DCAF12L2Q5VW00 463 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 CD200R1LQ6Q8B3 271 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 ASCL4Q6XD76 172 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 CEACAM19Q7Z692 300 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 SATL1Q86VE3 508 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 FAM58AQ8N1B3 248 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 ZNF561Q8N587 486 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 FAM216BQ8N7L0 139 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 OR5D18Q8NGL1 313 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 TNFAIP8L1Q8WVP5 186 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 EMG1Q92979 244 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 TMEM203Q969S6 136 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 DMRTB1Q96MA1 342 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 ZNF696Q9H7X3 374 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 TCF7L1Q9HCS4 588 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 HMG20AQ9NP66 347 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 RBFOX1Q9NWB1 397 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 LPAR3Q9UBY5 353 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 CDC42EP3Q9UKI2 254 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 INSIG2Q9Y5U4 225 aa11.45□□□□□ -0.58
CTNNA1-226ENST00000521368 MALRD1Q5VYJ5 2156 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 LOC105371242A0A075B767 164 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 A0A087WXM4 84 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 IGHV2-70DA0A0C4DH43 119 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 A0A1B0GW55 424 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 MAGEA13PA6NCF6 341 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 INAFM1C9JVW0 142 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 FCN3O75636 299 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 MAS1P04201 325 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 DUX4L2P0CJ85 424 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 DUX4L3P0CJ86 424 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 DUX4L4P0CJ87 422 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 DUX4L5P0CJ88 424 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 DUX4L6P0CJ89 424 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 DUX4L7P0CJ90 424 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 SRMP19623 302 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 HNF1AP20823 631 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 PSMB9P28065 219 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 GABRA2P47869 451 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 MTNR1BP49286 362 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 GP2P55259 537 aaKnown RBP11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 FABP5Q01469 135 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 DGUOKQ16854 277 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 CR1LQ2VPA4 569 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 FAM27D1Q5T7N8 215 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 ELP2Q6IA86 826 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 DUX4L9Q6RFH8 374 aaPredicted RBP11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 LYPD6Q86Y78 171 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 TEX29Q8N6K0 151 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 CD177Q8N6Q3 437 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 Q8NFD4 153 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 TSPAN14Q8NG11 270 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 RAB40AQ8WXH6 277 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 IL36GQ9NZH8 169 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 DUX4Q9UBX2 424 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 MAB21L2Q9Y586 359 aa11.44□□□□□ -0.58
CTNNA1-226ENST00000521368 KIR2DS1A0A191URI9 304 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 ENSAO43768 121 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 CRLF1O75462 422 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 INMTO95050 263 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 LIPFP07098 398 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 SFTPBP07988 381 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 CHRM2P08172 466 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 PRKACAP17612 351 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 OR3A4PP47883 348 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 FGF12P61328 243 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 IKZF1Q13422 519 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 FAM120AOSQ5T036 256 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 SYT6Q5T7P8 510 aaPredicted RBP11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 BTNL3Q6UXE8 466 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 LRRTM1Q86UE6 522 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 BATF2Q8N1L9 274 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 ST8SIA4Q92187 359 aa11.43□□□□□ -0.58
CTNNA1-226ENST00000521368 FOXRED1Q96CU9 486 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms