RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ZBTB25P24278 435 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 CTSSP25774 331 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 VHLLQ6RSH7 139 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 SLC30A7Q8NEW0 376 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 EMG1Q92979 244 aaKnown RBP9.84□□□□□ -0.83
CLK4-206ENST00000520878 OR2A7Q96R45 310 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 UFSP2Q9NUQ7 469 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 SHANK1Q9Y566 2161 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 IGKV1D-8A0A087WSZ0 117 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 NUPL2O15504 423 aaKnown RBP9.84□□□□□ -0.83
CLK4-206ENST00000520878 NXPH3O95157 252 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 PDGFAP04085 211 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 MELTFP08582 738 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 ZNF250P15622 560 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 BCL3P20749 454 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 CCL1P22362 96 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 CRYGSP22914 178 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 FABP6P51161 128 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 DEFA5Q01523 94 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 SLC51BQ86UW2 128 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 SUMF1Q8NBK3 374 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 SLC5A7Q9GZV3 580 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 C5orf66Q9H5L9 145 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 ANXA10Q9UJ72 324 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 CEP295Q9C0D2 2601 aa9.84□□□□□ -0.83
CLK4-206ENST00000520878 OR6C65A6NJZ3 312 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 PHF1O43189 567 aaPredicted RBP9.83□□□□□ -0.84
CLK4-206ENST00000520878 NME2P1O60361 137 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 FBXO24O75426 580 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 AGFG2O95081 481 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 APOC3P02656 99 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 FUT3P21217 361 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 NME2P22392 152 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 RTL6Q6ICC9 239 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 MDP1Q86V88 176 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 HOGA1Q86XE5 327 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 OR10AD1Q8NGE0 317 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 MITD1Q8WV92 249 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 EXTL1Q92935 676 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 IGKV1-27A0A075B6S5 117 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 A0A0D9SG52 128 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 KLK10O43240 276 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 IFNA2P01563 188 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 TBC1D28Q2M2D7 210 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 PLEKHN1Q494U1 663 aaPredicted RBP9.83□□□□□ -0.84
CLK4-206ENST00000520878 RNFT1Q5M7Z0 435 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 RFPL4BQ6ZWI9 263 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 SUN5Q8TC36 379 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 GPHA2Q96T91 129 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 PARD6AQ9NPB6 346 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 ASF1BQ9NVP2 202 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 DUSP13Q9UII6 198 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 FBXO9Q9UK97 447 aaPredicted RBP9.83□□□□□ -0.84
CLK4-206ENST00000520878 SPTAN1Q13813 2472 aaKnown RBP9.83□□□□□ -0.84
CLK4-206ENST00000520878 PKDREJQ9NTG1 2253 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 LEUTXA8MZ59 168 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 SLC34A2O95436 690 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 FPR2P25090 351 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 AKR1C2P52895 323 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 AKR1C1Q04828 323 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 LPCAT3Q6P1A2 487 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 TMEM200AQ86VY9 491 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 RTN4IP1Q8WWV3 396 aaPredicted RBP9.83□□□□□ -0.84
CLK4-206ENST00000520878 CXorf58Q96LI9 332 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 C1orf147Q96MC9 270 aaPredicted RBP9.83□□□□□ -0.84
CLK4-206ENST00000520878 SYT3Q9BQG1 590 aa9.83□□□□□ -0.84
CLK4-206ENST00000520878 WRBO00258 174 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 TNFSF12O43508 249 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 GALR2O43603 387 aaPredicted RBP9.82□□□□□ -0.84
CLK4-206ENST00000520878 ACTL6AO96019 429 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 TK1P04183 234 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 FBXW9Q5XUX1 488 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 C5orf24Q7Z6I8 188 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 SCARB1Q8WTV0 552 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 ZNF552Q9H707 407 aaPredicted RBP9.82□□□□□ -0.84
CLK4-206ENST00000520878 C12orf4Q9NQ89 552 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLK4-206ENST00000520878 GPR132Q9UNW8 380 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 NPTNQ9Y639 398 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 A0A1B0GV50 99 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 MPTX1A8MV57 137 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 SIRPB1O00241 398 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 TSPAN4O14817 238 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 AGPAT2O15120 278 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 PDCD6O75340 191 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 SFT2D2O95562 160 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 NAT2P11245 290 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 TOR2AQ5JU69 321 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 RPUSD3Q6P087 351 aaKnown RBP9.82□□□□□ -0.84
CLK4-206ENST00000520878 ACOT7LQ6ZUV0 252 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 CCDC54Q8NEL0 328 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 TMEM185AQ8NFB2 350 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 OR1J1Q8NGS3 322 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 ST8SIA2Q92186 375 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 Q96M66 194 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 C1orf123Q9NWV4 160 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 IL36RNQ9UBH0 155 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 ZNF107Q9UII5 783 aaPredicted RBP9.82□□□□□ -0.84
CLK4-206ENST00000520878 KCNS2Q9ULS6 477 aa9.82□□□□□ -0.84
CLK4-206ENST00000520878 hCG_38984A0A1B0GV85 526 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms