RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 S100A8P05109 93 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 CRYBA1P05813 215 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 IGHV4-34P06331 123 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 KCNJ3P48549 501 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 SLC37A1P57057 533 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 SSX2Q16385 188 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 SPINK14Q6IE38 97 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 RBMS3Q6XE24 437 aaKnown RBP9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 OR52N4Q8NGI2 321 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 ARHGAP5-AS1Q96IT6 56 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 USB1Q9BQ65 265 aaKnown RBP9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 FAM173AQ9BQD7 235 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 SCN8AQ9UQD0 1980 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 HEATR5BQ9P2D3 2071 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 FIGNL2A6NMB9 653 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 MPTX1A8MV57 137 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 SSSCA1O60232 199 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 SMIM10L1P0DMW3 83 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 RAB5CP51148 216 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 OR2B8PP59922 312 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 SLC16A13Q7RTY0 426 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 LDLRAD3Q86YD5 345 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 FAM219AQ8IW50 185 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 OR10D3Q8NH80 312 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 POC1BQ8TC44 478 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 MITD1Q8WV92 249 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 PIK3IP1Q96FE7 263 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 SMIM10Q96HG1 83 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 NIPSNAP3BQ9BS92 247 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 PMS2P1A4D2B8 440 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 MKRN2OSH3BPM6 223 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 FOXS1O43638 330 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 GALNSP34059 522 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 RAB32Q13637 225 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 MOGAT2Q3SYC2 334 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 SKA3Q8IX90 412 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 VWCEQ96DN2 955 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 GPX7Q96SL4 187 aaPredicted RBP9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 EGLN1Q9GZT9 426 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 OPA3Q9H6K4 179 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 PCOLCE2Q9UKZ9 415 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 ATP23Q9Y6H3 246 aa9.59□□□□□ -0.87
PCDHGA1-202ENST00000517417 ZNF705GA8MUZ8 300 aaPredicted RBP9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 JTBO76095 146 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZNF718Q3SXZ3 478 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 OR2T2Q6IF00 324 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 LCN15Q6UWW0 184 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 CATSPERDQ86XM0 798 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 DEFB124Q8NES8 71 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 PTPMT1Q8WUK0 201 aaPredicted RBP9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 PRR32B1ATL7 298 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 C17orf112F2Z3M2 114 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 H2AFB1P0C5Y9 115 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 MGAT2Q10469 447 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 SKP2Q13309 424 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 SLC35G3Q8N808 338 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 RIMS4Q9H426 269 aaPredicted RBP9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZMAT5Q9UDW3 170 aaKnown RBP9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 TRAV20A0A0B4J274 112 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 IAPPP10997 89 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 MNX1P50219 401 aaPredicted RBP9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 LGALS4P56470 323 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 RAB11AP62491 216 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 RBMXL3Q8N7X1 1067 aaKnown RBP9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 OR5AP2Q8NGF4 316 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 PLXND1Q9Y4D7 1925 aa9.58□□□□□ -0.88
PCDHGA1-202ENST00000517417 TRGV8A0A0C4DH27 118 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZNF724A8MTY0 619 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 SFT2D2O95562 160 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 FUT6P51993 359 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 TRA2AQ13595 282 aaKnown RBP eCLIP9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 PABPC1L2AQ5JQF8 200 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 ARHGEF39Q8N4T4 335 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 NUBPLQ8TB37 319 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 RXFP4Q8TDU9 374 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 LIN37Q96GY3 246 aaPredicted RBP9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 SEC11CQ9BY50 192 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 NKX6-3A6NJ46 265 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 UMAD1C9J7I0 102 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 DFFBO76075 338 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 FABP1P07148 127 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 ASAH2BP0C7U1 165 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 FUT7Q11130 342 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 ADIRFQ15847 76 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 HAGHQ16775 308 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 FAHD2BQ6P2I3 314 aaPredicted RBP9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 PRSS54Q6PEW0 395 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 C6orf201Q7Z4U5 140 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 ARRDC1Q8N5I2 433 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 OR8U1Q8NH10 309 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 APOBEC3DQ96AK3 386 aaPredicted RBP9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 DAZAP1Q96EP5 407 aaKnown RBP9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 FAHD2AQ96GK7 314 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 RAB18Q9NP72 206 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 INTS1Q8N201 2190 aaKnown RBP9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 IGKV1D-42A0A075B6H8 117 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 TRAV14DV4A0A0A6YYC5 116 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 SERPINE3A8MV23 424 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 PNPP00491 289 aa9.57□□□□□ -0.88
PCDHGA1-202ENST00000517417 RD3LP0DJH9 198 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms