RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 RPL18Q07020 188 aaKnown RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 CAMK2DQ13557 499 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 EXOSC2Q13868 293 aaKnown RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 GALEQ14376 348 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF273Q14593 569 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 PTGES3Q15185 160 aaKnown RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 SPHARQ15513 63 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 MED22Q15528 200 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 GABRA6Q16445 453 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 KCNMB1Q16558 191 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 LGALSLQ3ZCW2 172 aaPredicted RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC25A30Q5SVS4 291 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 C10orf128Q5T292 105 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 C9orf66Q5T8R8 295 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 TSPO2Q5TGU0 170 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 LCN1P1Q5VSP4 162 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 FAM27BQ5VT28 67 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 NIPAL3Q6P499 406 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 LRFN4Q6PJG9 635 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 METAP1DQ6UB28 335 aaPredicted RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 FAM131AQ6UXB0 335 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 CASP12Q6UXS9 341 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 UNQ6126/PRO20091Q6UXV3 157 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 TMEM91Q6ZNR0 172 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 RASSF6Q6ZTQ3 369 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 FOXL2NBQ6ZUU3 175 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 FAM122BQ7Z309 247 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 NR2C2APQ86WQ0 139 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 LSRQ86X29 649 aaPredicted RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 LINC00518Q8N0U6 118 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 UBE2J2Q8N2K1 259 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 GPR137CQ8N3F9 429 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 LNX2Q8N448 690 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 LRRC75AQ8NAA5 344 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 AQP11Q8NBQ7 271 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 PROKR2Q8NFJ6 384 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 OR52I1Q8NGK6 324 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 OR1K1Q8NGR3 316 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 OR6N1Q8NGY5 312 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 OR51A7Q8NH64 312 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 PFN4Q8NHR9 129 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF519Q8TB69 540 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 TMEM163Q8TC26 289 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 ENKURQ8TC29 256 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 HAVCR2Q8TDQ0 301 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 GIMAP1Q8WWP7 306 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 BCL2L2Q92843 193 aaPredicted RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 PTP4A1Q93096 173 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 CEP19Q96LK0 163 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 HYLS1Q96M11 299 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 LINC00052Q96N35 136 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF385AQ96PM9 386 aaKnown RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 DDOQ99489 341 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 ATF6BQ99941 703 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 MND1Q9BWT6 205 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 TSSK6Q9BXA6 273 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 TEX12Q9BXU0 123 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 PPIL3Q9H2H8 161 aaKnown RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 C1orf198Q9H425 327 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 CRLF2Q9HC73 371 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 GPR35Q9HC97 309 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 FGF20Q9NP95 211 aaPredicted RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 ISYNA1Q9NPH2 558 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 C12orf4Q9NQ89 552 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC17A5Q9NRA2 495 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 SLC7A10Q9NS82 523 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 MRPS18AQ9NVS2 196 aaKnown RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 C19orf73Q9NVV2 129 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 MED9Q9NWA0 146 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 SIGLEC8Q9NYZ4 499 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 PTTG3PQ9NZH4 202 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 VSX1Q9NZR4 365 aaPredicted RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 RHCGQ9UBD6 479 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 RABL2AQ9UBK7 228 aaPredicted RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 GRHPRQ9UBQ7 328 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 ATPIF1Q9UII2 106 aa2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 DIMT1Q9UNQ2 313 aaKnown RBP2.52□□□□□ -2.01
SCARNA13-201ENST00000516672 MEIKINA0A087WXM9 373 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 TRDV1A0A1B0GX56 115 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 hCG_1807616A0A1W2PRN6 198 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 SMIM30A4D0T7 59 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 PRSS37A4D1T9 235 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 FABP12A6NFH5 140 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 VSTM5A8MXK1 200 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 A8MXK9 166 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 MCIDASD6RGH6 385 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 LRRN3E7EW58 273 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 J3QRE1 110 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 DNASE2O00115 360 aaPredicted RBP2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 ZNF593O00488 134 aaPredicted RBP2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 BHLHE40O14503 412 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 RGS5O15539 181 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 TGOLN2O43493 480 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 ORC5O43913 435 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 PRKYO43930 277 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 MPZL2O60487 215 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 UPK3AO75631 287 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 NCR1O76036 304 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 UBL3O95164 117 aa2.51□□□□□ -2.01
SCARNA13-201ENST00000516672 RAB36O95755 333 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms