RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 S100A13Q99584 98 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 CCL13Q99616 98 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 UQCC2Q9BRT2 126 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 FAM192AQ9GZU8 254 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 SEBOXQ9HB31 216 aaPredicted RBP9.92□□□□□ -0.82
SNF8-215ENST00000515572 CTSZQ9UBR2 303 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 OR5V1Q9UGF6 321 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 ZANQ9Y493 2812 aa9.92□□□□□ -0.82
SNF8-215ENST00000515572 MALRD1Q5VYJ5 2156 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 IGKV1D-17A0A075B6S4 117 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 IGKV1-12A0A0C4DH73 117 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 MAGEA13PA6NCF6 341 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 RFPL4AA6NLU0 287 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 A8MV72 311 aaPredicted RBP9.91□□□□□ -0.82
SNF8-215ENST00000515572 RFPL4AL1F8VTS6 287 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 DVL1O14640 695 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 GPR37O15354 613 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 SIGLEC5O15389 551 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 NDUFB3O43676 98 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 IGKV1D-12P01611 117 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 BCL3P20749 454 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 PRDX2P32119 198 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 GABRA2P47869 451 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 OR3A4PP47883 348 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 MTNR1BP49286 362 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 GP2P55259 537 aaKnown RBP9.91□□□□□ -0.82
SNF8-215ENST00000515572 SEC61A1P61619 476 aaKnown RBP9.91□□□□□ -0.82
SNF8-215ENST00000515572 LCN2P80188 198 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 RSU1Q15404 277 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 LRRC10Q5BKY1 277 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 CD276Q5ZPR3 534 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 WDR25Q64LD2 544 aaPredicted RBP9.91□□□□□ -0.82
SNF8-215ENST00000515572 ASCL4Q6XD76 172 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 ZNF841Q6ZN19 808 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 RNF144BQ7Z419 303 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 ZNF561Q8N587 486 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 JAGN1Q8N5M9 183 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 TMEM186Q96B77 213 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 SDSLQ96GA7 329 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 PPIL3Q9H2H8 161 aaKnown RBP9.91□□□□□ -0.82
SNF8-215ENST00000515572 GSX1Q9H4S2 264 aaPredicted RBP9.91□□□□□ -0.82
SNF8-215ENST00000515572 LPAR2Q9HBW0 351 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 HMG20AQ9NP66 347 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 YAE1D1Q9NRH1 226 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 PCDHB16Q9NRJ7 776 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 RBFOX1Q9NWB1 397 aaKnown RBP9.91□□□□□ -0.82
SNF8-215ENST00000515572 HIF1ANQ9NWT6 349 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 IL36GQ9NZH8 169 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 GLS2Q9UI32 602 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 ZNF222Q9UK12 451 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 KCNS2Q9ULS6 477 aa9.91□□□□□ -0.82
SNF8-215ENST00000515572 VPS13CQ709C8 3753 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 A0A0G2JMP0 313 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 A0A0X1KG70 313 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 KIAA1324LA8MWY0 1029 aaPredicted RBP9.9□□□□□ -0.82
SNF8-215ENST00000515572 F8VVB4 439 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 F8VWA3 439 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 PHF1O43189 567 aaPredicted RBP9.9□□□□□ -0.82
SNF8-215ENST00000515572 ZNF780AO75290 641 aaPredicted RBP9.9□□□□□ -0.82
SNF8-215ENST00000515572 ECDO95905 644 aaPredicted RBP9.9□□□□□ -0.82
SNF8-215ENST00000515572 JUNBP17275 347 aaPredicted RBP9.9□□□□□ -0.82
SNF8-215ENST00000515572 AMY2BP19961 511 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 CALRP27797 417 aaKnown RBP9.9□□□□□ -0.82
SNF8-215ENST00000515572 FGF9P31371 208 aaPredicted RBP9.9□□□□□ -0.82
SNF8-215ENST00000515572 RANBP1P43487 201 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 NPBWR2P48146 333 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 FGF12P61328 243 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 GPR176Q14439 515 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 ZNF146Q15072 292 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 GLT8D1Q68CQ7 371 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 ELP2Q6IA86 826 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 LRRTM1Q86UE6 522 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 LYPD6Q86Y78 171 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 BATF2Q8N1L9 274 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 FAM216BQ8N7L0 139 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 Q8NFD4 153 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 OR4M2Q8NGB6 313 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 GAFA1Q96PS6 74 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 METTL9Q9H1A3 318 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 CNTD2Q9H8S5 307 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 ELL3Q9HB65 397 aaPredicted RBP9.9□□□□□ -0.82
SNF8-215ENST00000515572 TMEM160Q9NX00 188 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 GHRLQ9UBU3 117 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 STUB1Q9UNE7 303 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 SSR3Q9UNL2 185 aa9.9□□□□□ -0.82
SNF8-215ENST00000515572 LOC105371242A0A075B767 164 aa9.89□□□□□ -0.83
SNF8-215ENST00000515572 TRAV1-2A0A0B4J238 106 aa9.89□□□□□ -0.83
SNF8-215ENST00000515572 J3QLI3 93 aa9.89□□□□□ -0.83
SNF8-215ENST00000515572 CSTBP04080 98 aaKnown RBP9.89□□□□□ -0.83
SNF8-215ENST00000515572 SFTPBP07988 381 aa9.89□□□□□ -0.83
SNF8-215ENST00000515572 CHRM2P08172 466 aa9.89□□□□□ -0.83
SNF8-215ENST00000515572 CD36P16671 472 aa9.89□□□□□ -0.83
SNF8-215ENST00000515572 PRKACAP17612 351 aa9.89□□□□□ -0.83
SNF8-215ENST00000515572 ADRA2CP18825 462 aa9.89□□□□□ -0.83
SNF8-215ENST00000515572 MYL9P24844 172 aa9.89□□□□□ -0.83
SNF8-215ENST00000515572 ZFP36P26651 326 aaKnown RBP9.89□□□□□ -0.83
SNF8-215ENST00000515572 PSMD7P51665 324 aa9.89□□□□□ -0.83
SNF8-215ENST00000515572 CAV3P56539 151 aa9.89□□□□□ -0.83
SNF8-215ENST00000515572 IKZF1Q13422 519 aa9.89□□□□□ -0.83
SNF8-215ENST00000515572 C1orf100Q5SVJ3 147 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms