RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 OCM2P0CE71 109 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 OCMP0CE72 109 aaPredicted RBP10.52□□□□□ -0.73
CLCN3-210ENST00000515420 PRTN3P24158 256 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 MTCP1P56278 107 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 GUCA2AQ02747 115 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 CDK5R1Q15078 307 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 FIP1L1Q6UN15 594 aaKnown RBP10.52□□□□□ -0.73
CLCN3-210ENST00000515420 VMO1Q7Z5L0 202 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 SAXO1Q8IYX7 474 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.52□□□□□ -0.73
CLCN3-210ENST00000515420 CPNE2Q96FN4 548 aaPredicted RBP10.52□□□□□ -0.73
CLCN3-210ENST00000515420 ZNF48Q96MX3 618 aaPredicted RBP10.52□□□□□ -0.73
CLCN3-210ENST00000515420 ZCCHC4Q9H5U6 513 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 METTL8Q9H825 291 aaKnown RBP10.52□□□□□ -0.73
CLCN3-210ENST00000515420 NOX4Q9NPH5 578 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 CHCHD3Q9NX63 227 aaKnown RBP10.52□□□□□ -0.73
CLCN3-210ENST00000515420 ONECUT1Q9UBC0 465 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 DHDHQ9UQ10 334 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 DSCAML1Q8TD84 2053 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 IGHV3OR16-10A0A075B7F0 116 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 A0A1W2PPH5 198 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 A0A1W2PQ09 198 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 DNAJC9-AS1A6NH13 148 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 OGG1O15527 345 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 SULT1B1O43704 296 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 TFF1P04155 84 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 CD2P06729 351 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 CHRM2P08172 466 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 COMPP49747 757 aaPredicted RBP10.51□□□□□ -0.73
CLCN3-210ENST00000515420 CAPZA1P52907 286 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 ST3GAL4Q11206 333 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 PDZK1IP1Q13113 114 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 BAMBIQ13145 260 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 BLMHQ13867 455 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 SPIN3Q5JUX0 258 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 OR2G6Q5TZ20 316 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 NCR3LG1Q68D85 454 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 BRD3OSQ6XYD6 125 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 OR13C9Q8NGT0 318 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 GPR148Q8TDV2 347 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 TSEN15Q8WW01 171 aaKnown RBP10.51□□□□□ -0.73
CLCN3-210ENST00000515420 GGHQ92820 318 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 SLAMF9Q96A28 289 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 SMIM19Q96E16 107 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 BABAM2Q9NXR7 383 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 NKX1-2Q9UD57 310 aaPredicted RBP10.51□□□□□ -0.73
CLCN3-210ENST00000515420 PSORS1C1Q9UIG5 152 aa10.51□□□□□ -0.73
CLCN3-210ENST00000515420 TMEM89A2RUT3 159 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 K7N7A8 449 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 ZNF737O75373 536 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 TK1P04183 234 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 RNASE1P07998 156 aaKnown RBP10.5□□□□□ -0.73
CLCN3-210ENST00000515420 POU3F4P49335 361 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 GTF2A1P52655 376 aaPredicted RBP10.5□□□□□ -0.73
CLCN3-210ENST00000515420 TAS2R43P59537 309 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 RPL31P62899 125 aaKnown RBP10.5□□□□□ -0.73
CLCN3-210ENST00000515420 ACTG1P63261 375 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 ZNF146Q15072 292 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 XAF1Q6GPH4 301 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 ZNF529Q6P280 563 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 FAM58AQ8N1B3 248 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 TMEM86BQ8N661 226 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 Q8N7P7 452 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 ZSCAN4Q8NAM6 433 aaPredicted RBP10.5□□□□□ -0.73
CLCN3-210ENST00000515420 ZNF485Q8NCK3 441 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 OR5D13Q8NGL4 314 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 EMG1Q92979 244 aaKnown RBP10.5□□□□□ -0.73
CLCN3-210ENST00000515420 LHX4Q969G2 390 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 SLC25A28Q96A46 364 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 C1orf147Q96MC9 270 aaPredicted RBP10.5□□□□□ -0.73
CLCN3-210ENST00000515420 VCX3BQ9H321 246 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 OR14J1Q9UGF5 321 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 ZNF281Q9Y2X9 895 aa10.5□□□□□ -0.73
CLCN3-210ENST00000515420 hCG_1809904A0A1W2PP81 198 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 A0A1W2PPE2 198 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 A0A1W2PR64 198 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 A0A1W2PRV1 198 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 F8VVB4 439 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 F8VWA3 439 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 KDM4BO94953 1096 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 RAB3AP20336 220 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 CEBPDP49716 269 aaPredicted RBP10.49□□□□□ -0.73
CLCN3-210ENST00000515420 COL10A1Q03692 680 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 SLC9A3R2Q15599 337 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 DEFB112Q30KQ8 113 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 DMKNQ6E0U4 476 aaPredicted RBP10.49□□□□□ -0.73
CLCN3-210ENST00000515420 LAIR2Q6ISS4 152 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 CRIP3Q6Q6R5 217 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 Q6YL49 198 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 ASCC1Q8N9N2 400 aaKnown RBP10.49□□□□□ -0.73
CLCN3-210ENST00000515420 RGP1Q92546 391 aaPredicted RBP10.49□□□□□ -0.73
CLCN3-210ENST00000515420 TNFRSF14Q92956 283 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 SNX22Q96L94 193 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 ELL3Q9HB65 397 aaPredicted RBP10.49□□□□□ -0.73
CLCN3-210ENST00000515420 HMG20AQ9NP66 347 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 FKBP14Q9NWM8 211 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 GLS2Q9UI32 602 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 PCDHGB5Q9Y5G0 923 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 POMT1Q9Y6A1 747 aa10.49□□□□□ -0.73
CLCN3-210ENST00000515420 RNASEK-C17orf49H0YIS7 233 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms