RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 AANATQ16613 207 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 ZIK1Q3SY52 487 aaPredicted RBP8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 TMEM244Q5VVB8 128 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 CCDC121Q6ZUS5 278 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 SLC25A26Q70HW3 274 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 UTS2BQ765I0 119 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 Q8IYB0 196 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 RDH10Q8IZV5 341 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 ASCC1Q8N9N2 400 aaKnown RBP8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 DNAAF1Q8NEP3 725 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 LGALS12Q96DT0 336 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 ADAT3Q96EY9 351 aaPredicted RBP8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 MEGF9Q9H1U4 602 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 HEXA-AS1Q9H8Q6 139 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 FRRS1LQ9P0K9 344 aa8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 EXOGQ9Y2C4 368 aaKnown RBP8.51□□□□□ -1.05
HMGXB3-205ENST00000514469 TRBV2A0A0J9YWF9 115 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 hCG_1809904A0A1W2PP81 198 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 A0A1W2PPE2 198 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 A0A1W2PR64 198 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 A0A1W2PRV1 198 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 DAPL1A0PJW8 107 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 C17orf98A8MV24 154 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 H3BUX3 64 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 RBP4P02753 201 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 CHRM2P08172 466 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 HTR1AP08908 422 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 PIPP12273 146 aaPredicted RBP8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 AZGP1P25311 298 aaKnown RBP8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 TGFBR2P37173 567 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 RBP2P50120 134 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 CCR9P51686 369 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 OR12D2P58182 307 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 ERVFRD-1P60508 538 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 ACTA2P62736 377 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 ACTG2P63267 376 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 ZNF91Q05481 1191 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 LRRC75BQ2VPJ9 315 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 TCF23Q7RTU1 214 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 ENTHD1Q8IYW4 607 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 OR8H2Q8N162 312 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 EMG1Q92979 244 aaKnown RBP8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 PELI1Q96FA3 418 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 C9orf16Q9BUW7 83 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 SEBOXQ9HB31 216 aaPredicted RBP8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 IL36RNQ9UBH0 155 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 GMPPBQ9Y5P6 360 aa8.5□□□□□ -1.05
HMGXB3-205ENST00000514469 TMEM82A0PJX8 343 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 SNTNA6NMZ2 147 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 OR4C45A6NMZ5 311 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 ODF3BA8MYP8 253 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 HAND1O96004 215 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 IGHA1P01876 353 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 DBTP11182 482 aaKnown RBP8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 ZNF20P17024 532 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 ATF1P18846 271 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 PRKACBP22694 351 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 COX7A1P24310 79 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 ATP1B3P54709 279 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 SPIN3Q5JUX0 258 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 CRIP3Q6Q6R5 217 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 ZNF782Q6ZMW2 699 aaPredicted RBP8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 LHFPL2Q6ZUX7 228 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 EGFL6Q8IUX8 553 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 SYS1Q8N2H4 156 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 ACBD7Q8N6N7 88 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 OR51A4Q8NGJ6 313 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 OR10AC1Q8NH08 325 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 SPSB1Q96BD6 273 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 FGGYQ96C11 551 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 C4orf36Q96KX1 117 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 SNX22Q96L94 193 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 SSX3Q99909 188 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 PPA2Q9H2U2 334 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 RBFOX1Q9NWB1 397 aaKnown RBP8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 AASSQ9UDR5 926 aa8.49□□□□□ -1.05
HMGXB3-205ENST00000514469 MEGF11A6BM72 1044 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 FAM90A8PA6NJQ4 464 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 VGLL3A8MV65 326 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 J3QLW9 94 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 M0QZ24 198 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 TIMM23O14925 209 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 MPZL2O60487 215 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 PSPNO60542 156 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 INMTO95050 263 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 MT-ND2P03891 347 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 ZNF728P0DKX0 622 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 IGHV1-8P0DP01 117 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 ZNF19P17023 458 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 BCL3P20749 454 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 PAX6P26367 422 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 NPBWR2P48146 333 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 POU3F4P49335 361 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 MTCP1P56278 107 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 EDDM3BP56851 147 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 MEF2CQ06413 473 aaPredicted RBP8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 ALKBH1Q13686 389 aaKnown RBP8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 GALEQ14376 348 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 ZNF146Q15072 292 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 ZNF626Q68DY1 528 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms