RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 ESPL1Q14674 2120 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 SLC25A42Q86VD7 318 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 TMEM17Q86X19 198 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 MARS2Q96GW9 593 aaKnown RBP12.78□□□□□ -0.36
PHF3-209ENST00000509330 ZNF2Q9BSG1 426 aaPredicted RBP12.78□□□□□ -0.36
PHF3-209ENST00000509330 ZNF71Q9NQZ8 489 aaPredicted RBP12.78□□□□□ -0.36
PHF3-209ENST00000509330 ICE1Q9Y2F5 2266 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 H3BUI4 141 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 MPC2O95563 127 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 ZBTB25P24278 435 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 CHATP28329 748 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 RAP2BP61225 183 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 TGFBR3Q03167 851 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 TBC1D28Q2M2D7 210 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 LYG2Q86SG7 212 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 ZNF610Q8N9Z0 462 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 OR5AP2Q8NGF4 316 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 NEK7Q8TDX7 302 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 CDH20Q9HBT6 801 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 MTCH1Q9NZJ7 389 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 SH3BGRL2Q9UJC5 107 aa12.78□□□□□ -0.36
PHF3-209ENST00000509330 ANKRD30BLA7E2S9 258 aa12.77□□□□□ -0.36
PHF3-209ENST00000509330 RHBDL1O75783 438 aa12.77□□□□□ -0.36
PHF3-209ENST00000509330 CFDP00746 253 aaPredicted RBP12.77□□□□□ -0.36
PHF3-209ENST00000509330 AADACL3Q5VUY0 350 aa12.77□□□□□ -0.36
PHF3-209ENST00000509330 SCNM1Q9BWG6 230 aa12.77□□□□□ -0.36
PHF3-209ENST00000509330 ATPIF1Q9UII2 106 aa12.77□□□□□ -0.36
PHF3-209ENST00000509330 PQLC2LA1A4F0 135 aa12.77□□□□□ -0.37
PHF3-209ENST00000509330 L7N2F9 121 aa12.77□□□□□ -0.37
PHF3-209ENST00000509330 OR2A4O95047 310 aa12.77□□□□□ -0.37
PHF3-209ENST00000509330 COX5BP10606 129 aa12.77□□□□□ -0.37
PHF3-209ENST00000509330 PPP3CBP16298 524 aa12.77□□□□□ -0.37
PHF3-209ENST00000509330 HOXC12P31275 282 aa12.77□□□□□ -0.37
PHF3-209ENST00000509330 RBM11P57052 281 aaKnown RBP12.77□□□□□ -0.37
PHF3-209ENST00000509330 PLEKHN1Q494U1 663 aaPredicted RBP12.77□□□□□ -0.37
PHF3-209ENST00000509330 BEX5Q5H9J7 111 aa12.77□□□□□ -0.37
PHF3-209ENST00000509330 SLC22A25Q6T423 547 aa12.77□□□□□ -0.37
PHF3-209ENST00000509330 OR8H3Q8N146 312 aa12.77□□□□□ -0.37
PHF3-209ENST00000509330 ZNF75AQ96N20 296 aa12.77□□□□□ -0.37
PHF3-209ENST00000509330 OR2A7Q96R45 310 aa12.77□□□□□ -0.37
PHF3-209ENST00000509330 ALX4Q9H161 411 aaPredicted RBP12.77□□□□□ -0.37
PHF3-209ENST00000509330 LIME1Q9H400 295 aa12.77□□□□□ -0.37
PHF3-209ENST00000509330 CHMP1AQ9HD42 196 aaPredicted RBP12.77□□□□□ -0.37
PHF3-209ENST00000509330 DKK4Q9UBT3 224 aa12.77□□□□□ -0.37
PHF3-209ENST00000509330 CEACAM4O75871 244 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 RGS11O94810 467 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 ZNF14P17017 642 aaPredicted RBP12.76□□□□□ -0.37
PHF3-209ENST00000509330 GABRA6Q16445 453 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 CEACAM21Q3KPI0 293 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 Q6ZT83 130 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 CXorf67Q86X51 503 aaPredicted RBP12.76□□□□□ -0.37
PHF3-209ENST00000509330 TMEM230Q96A57 120 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 GPR137Q96N19 417 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 SHANK1Q9Y566 2161 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 TLN1Q9Y490 2541 aaKnown RBP12.76□□□□□ -0.37
PHF3-209ENST00000509330 ADAP1O75689 374 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 FCGR3AP08637 254 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 PRKACAP17612 351 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 NAT1P18440 290 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 DAZAP2Q15038 168 aaPredicted RBP12.76□□□□□ -0.37
PHF3-209ENST00000509330 VAX1Q5SQQ9 334 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 Q6ZPA2 131 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 RBMXL3Q8N7X1 1067 aaKnown RBP12.76□□□□□ -0.37
PHF3-209ENST00000509330 OR1J1Q8NGS3 322 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 SLC25A40Q8TBP6 338 aa12.76□□□□□ -0.37
PHF3-209ENST00000509330 C5orf51A6NDU8 294 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 MPTX1A8MV57 137 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 HS3ST1O14792 307 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 CBX5P45973 191 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 IKZF1Q13422 519 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 SEM1Q6ZVN7 128 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 OVCH2Q7RTZ1 564 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 ARRDC1Q8N5I2 433 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 ZDHHC22Q8N966 263 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 CITED4Q96RK1 184 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 HEXA-AS1Q9H8Q6 139 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 ANXA10Q9UJ72 324 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 ANAPC10Q9UM13 185 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 LHX6Q9UPM6 363 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 M0R233 179 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 SMPD2O60906 423 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 NFYAP23511 347 aaPredicted RBP12.75□□□□□ -0.37
PHF3-209ENST00000509330 PTGER4P35408 488 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 TAS2R46P59540 309 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 PPP1CBP62140 327 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 PXT1Q8NFP0 134 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 LILRB4Q8NHJ6 448 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 PHB2Q99623 299 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 PRRX2Q99811 253 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 RDH8Q9NYR8 311 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 GPR132Q9UNW8 380 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 NBASA2RRP1 2371 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 TRAPPC2LH3BP13 241 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 ERVH48-1M5A8F1 160 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 WDR1O75083 606 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 OR5H8P0DN80 308 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 TBPP20226 339 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 RDH5Q92781 318 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 ABHD17AQ96GS6 310 aa12.75□□□□□ -0.37
PHF3-209ENST00000509330 RTBDNQ9BSG5 229 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms