RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 ZNF41P51814 821 aaPredicted RBP12.55□□□□□ -0.4
TRIM41-204ENST00000508930 ELOBQ15370 118 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 LIAT1Q6ZQX7 453 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 C1orf87Q8N0U7 546 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 SLC22A18ASQ8N1D0 253 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 LRRC18Q8N456 261 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 OR2C3Q8N628 320 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 CCDC54Q8NEL0 328 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 GABRG3Q99928 467 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 PIGLQ9Y2B2 252 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 TMED3Q9Y3Q3 217 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 PHF3Q92576 2039 aaKnown RBP12.55□□□□□ -0.4
TRIM41-204ENST00000508930 ZNF705GA8MUZ8 300 aaPredicted RBP12.55□□□□□ -0.4
TRIM41-204ENST00000508930 K7N7A8 449 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 CST7O76096 145 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 SOD3P08294 240 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 LBX1P52954 281 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 MTCP1P56278 107 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 RAB11AP62491 216 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 PACRGQ96M98 296 aaPredicted RBP12.55□□□□□ -0.4
TRIM41-204ENST00000508930 SMDT1Q9H4I9 107 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 SLC31A2O15432 143 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 ZNF43P17038 809 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 NKX2-1P43699 371 aaPredicted RBP12.54□□□□□ -0.4
TRIM41-204ENST00000508930 ZNF133P52736 654 aaPredicted RBP12.54□□□□□ -0.4
TRIM41-204ENST00000508930 TMEM187Q14656 261 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 BRICD5Q6PL45 260 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 FAM89BQ8N5H3 189 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 CCDC71LQ8N9Z2 235 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 ST8SIA1Q92185 356 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 NKX2-4Q9H2Z4 354 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 ALKBH4Q9NXW9 302 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 HS3ST3B1Q9Y662 390 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 CCDC187A0A096LP49 1063 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 A0A1W2PNR3 127 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 TLX3O43711 291 aaPredicted RBP12.54□□□□□ -0.4
TRIM41-204ENST00000508930 TRGC1P0CF51 173 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 TUBG1P23258 451 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 ERVFRD-1P60508 538 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 C17orf67Q0P5P2 114 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 FZD2Q14332 565 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 CPNE4Q96A23 557 aaPredicted RBP12.54□□□□□ -0.4
TRIM41-204ENST00000508930 PRDM13Q9H4Q3 707 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 ARGFXA6NJG6 315 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 TNFSF12O43508 249 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 NXPH3O95157 252 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 CAPZBP47756 277 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 UCP2P55851 309 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 DPPA2Q7Z7J5 298 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 NOXO1Q8NFA2 376 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 SNX22Q96L94 193 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 GPR173Q9NS66 373 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 KIAA1456Q9P272 454 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 MYO7BQ6PIF6 2116 aa12.54□□□□□ -0.4
TRIM41-204ENST00000508930 SSSCA1O60232 199 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 SRP19P09132 144 aaKnown RBP12.53□□□□□ -0.4
TRIM41-204ENST00000508930 MDKP21741 143 aaPredicted RBP12.53□□□□□ -0.4
TRIM41-204ENST00000508930 MNX1P50219 401 aaPredicted RBP12.53□□□□□ -0.4
TRIM41-204ENST00000508930 ZNF124Q15973 351 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 CDCP2Q5VXM1 449 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 ZNF695Q8IW36 515 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 CMTM1Q8IZ96 169 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 HIST3H2BBQ8N257 126 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 OR11L1Q8NGX0 322 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 SLC25A31Q9H0C2 315 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 SLC2A9Q9NRM0 540 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 HS3ST3A1Q9Y663 406 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 ALDH3B1P43353 468 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 TMEM176BQ3YBM2 270 aaPredicted RBP12.53□□□□□ -0.4
TRIM41-204ENST00000508930 OR1N1Q8NGS0 311 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 LMX1AQ8TE12 382 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 BADQ92934 168 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 TWSG1Q9GZX9 223 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 LRFN1Q9P244 771 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 GNG13Q9P2W3 67 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 SLCO1B1Q9Y6L6 691 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 ATXN7O15265 892 aaPredicted RBP12.53□□□□□ -0.4
TRIM41-204ENST00000508930 POU2F2P09086 479 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 GRB2P62993 217 aaKnown RBP12.53□□□□□ -0.4
TRIM41-204ENST00000508930 DYRK2Q92630 601 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 KLHDC7BQ96G42 594 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 METTL9Q9H1A3 318 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 SIRT7Q9NRC8 400 aa12.53□□□□□ -0.4
TRIM41-204ENST00000508930 ANKUB1A6NFN9 424 aa12.52□□□□□ -0.4
TRIM41-204ENST00000508930 LIPT2A6NK58 231 aa12.52□□□□□ -0.4
TRIM41-204ENST00000508930 SCAF4O95104 1147 aaKnown RBP12.52□□□□□ -0.4
TRIM41-204ENST00000508930 HLA-DRB3P79483 266 aa12.52□□□□□ -0.4
TRIM41-204ENST00000508930 TLE4Q04727 773 aa12.52□□□□□ -0.4
TRIM41-204ENST00000508930 MYBPHQ13203 477 aa12.52□□□□□ -0.4
TRIM41-204ENST00000508930 LANCL3Q6ZV70 420 aa12.52□□□□□ -0.4
TRIM41-204ENST00000508930 C17orf78Q8N4C9 275 aa12.52□□□□□ -0.4
TRIM41-204ENST00000508930 OR5C1Q8NGR4 320 aa12.52□□□□□ -0.4
TRIM41-204ENST00000508930 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.52□□□□□ -0.41
TRIM41-204ENST00000508930 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.52□□□□□ -0.41
TRIM41-204ENST00000508930 ZFP92A6NM28 416 aa12.52□□□□□ -0.41
TRIM41-204ENST00000508930 SPRY1O43609 319 aaPredicted RBP12.52□□□□□ -0.41
TRIM41-204ENST00000508930 SELLP14151 372 aa12.52□□□□□ -0.41
TRIM41-204ENST00000508930 GNRHRP30968 328 aa12.52□□□□□ -0.41
TRIM41-204ENST00000508930 COL13A1Q5TAT6 717 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms