RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 ERVK11-1P61568 191 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 DEFA6Q01524 100 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 ODF4Q2M2E3 257 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 C17orf107Q6ZR85 190 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 ANGPTL5Q86XS5 388 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 GID4Q8IVV7 300 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 FAM185AQ8N0U4 392 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 RORBQ92753 470 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 UBE2FQ969M7 185 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 NRIP2Q9BQI9 281 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 WARS2Q9UGM6 360 aaKnown RBP13.22□□□□□ -0.29
LMNA-222ENST00000508500 VPREB3Q9UKI3 123 aa13.22□□□□□ -0.29
LMNA-222ENST00000508500 IGKV1-27A0A075B6S5 117 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 TRBV23-1A0A0A0MS06 115 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 F8VVB4 439 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 F8VWA3 439 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 SLC1A7O00341 560 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 CRHBPP24387 322 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 EEF1B2P24534 225 aaKnown RBP13.21□□□□□ -0.29
LMNA-222ENST00000508500 HTR1FP30939 366 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 UBE2V2Q15819 145 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 TMEM200BQ69YZ2 307 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 ASPHD2Q6ICH7 369 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 GDPGP1Q6ZNW5 385 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 ZNF573Q86YE8 665 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 MKXQ8IYA7 352 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 PRSS35Q8N3Z0 413 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 YIPF7Q8N8F6 280 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 TSPAN14Q8NG11 270 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 C16orf95Q9H693 158 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 CAB39Q9Y376 341 aaPredicted RBP13.21□□□□□ -0.29
LMNA-222ENST00000508500 PCDHGB5Q9Y5G0 923 aa13.21□□□□□ -0.29
LMNA-222ENST00000508500 DHRS7CA6NNS2 312 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 WBP4O75554 376 aaKnown RBP13.2□□□□□ -0.3
LMNA-222ENST00000508500 TSPAN9O75954 239 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 OR2T7P0C7T2 308 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 CCL3L1P16619 93 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 ZNF85Q03923 595 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 ACSM1Q08AH1 577 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 ZNF273Q14593 569 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 SMIM21Q3B7S5 101 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 NCR3LG1Q68D85 454 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 BRICD5Q6PL45 260 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 ZNF561Q8N587 486 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 BEND2Q8NDZ0 799 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 OR4M1Q8NGD0 313 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 OR2T27Q8NH04 317 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 TRMT10AQ8TBZ6 339 aaKnown RBP13.2□□□□□ -0.3
LMNA-222ENST00000508500 DUSP21Q9H596 190 aa13.2□□□□□ -0.3
LMNA-222ENST00000508500 CNOT2Q9NZN8 540 aaKnown RBP13.2□□□□□ -0.3
LMNA-222ENST00000508500 IRGMA1A4Y4 181 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 ANKRD61A6NGH8 418 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 METTL15A6NJ78 407 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 KRT8P05787 483 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 KIR3DL2P43630 455 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 CAPZA1P52907 286 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 DLX6P56179 175 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 IL24Q13007 206 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 TMED1Q13445 227 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 LAIR2Q6ISS4 152 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 CRIP3Q6Q6R5 217 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 PPP1R35Q8TAP8 253 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 APH1BQ8WW43 257 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 MEGF9Q9H1U4 602 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 MTCH1Q9NZJ7 389 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 OR14J1Q9UGF5 321 aa13.19□□□□□ -0.3
LMNA-222ENST00000508500 FAM230AA0A1W2PPH8 454 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 EFCAB10A6NFE3 127 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 H3BUX3 64 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 ANGPTL7O43827 346 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 NXPH2O95156 264 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 TK1P04183 234 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 PIPP12273 146 aaPredicted RBP13.18□□□□□ -0.3
LMNA-222ENST00000508500 RPL31P62899 125 aaKnown RBP13.18□□□□□ -0.3
LMNA-222ENST00000508500 SLC35A2P78381 396 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 TP53I3Q53FA7 332 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 DHRS7BQ6IAN0 325 aaPredicted RBP13.18□□□□□ -0.3
LMNA-222ENST00000508500 SLC35E4Q6ICL7 350 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 ZNF773Q6PK81 442 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 RDH10Q8IZV5 341 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 OR10H4Q8NGA5 316 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 OR5D13Q8NGL4 314 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 CNIH3Q8TBE1 160 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 RFKQ969G6 155 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 MYDGFQ969H8 173 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 SSX3Q99909 188 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 PKIBQ9C010 78 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 VCX3AQ9NNX9 186 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 POLDIP2Q9Y2S7 368 aa13.18□□□□□ -0.3
LMNA-222ENST00000508500 SF3B6Q9Y3B4 125 aaKnown RBP13.18□□□□□ -0.3
LMNA-222ENST00000508500 RPL36Q9Y3U8 105 aaKnown RBP13.18□□□□□ -0.3
LMNA-222ENST00000508500 J3QRE1 110 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 K7N7A8 449 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 PLXNB1O43157 2135 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 SYT7O43581 403 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 ZNF737O75373 536 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 SULT1C4O75897 302 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 PAHP00439 452 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 SMIM18P0DKX4 95 aa13.17□□□□□ -0.3
LMNA-222ENST00000508500 TGFBR2P37173 567 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms