RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-223	ENST00000508249	ATF1	P18846	271 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	CAV3	P56539	151 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	NANOS3	P60323	173 aa	Known RBP	7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	BDH1	Q02338	343 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	ST3GAL4	Q11206	333 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	SMN1	Q16637	294 aa	Known RBP	7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	DEFB112	Q30KQ8	113 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	ZNF841	Q6ZN19	808 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	ZNF788	Q6ZQV5	615 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	SERPINA12	Q8IW75	414 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	MKX	Q8IYA7	352 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	PARP16	Q8N5Y8	322 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	OR5D14	Q8NGL3	314 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	OR13C3	Q8NGS6	347 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	LINC01006	Q8NI28	216 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	ANGPTL6	Q8NI99	470 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	FAM110D	Q8TAY7	271 aa	Predicted RBP	7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	GPR148	Q8TDV2	347 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	GGH	Q92820	318 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	MYDGF	Q969H8	173 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	UPRT	Q96BW1	309 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	SMIM19	Q96E16	107 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	OPALIN	Q96PE5	141 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	NRIP2	Q9BQI9	281 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	ANKRD60	Q9BZ19	345 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	FGF23	Q9GZV9	251 aa	Predicted RBP	7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	ZCCHC4	Q9H5U6	513 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	ERGIC3	Q9Y282	383 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	TPRKB	Q9Y3C4	175 aa		7.59	□□□□□ -1.19
UBE2D3-223	ENST00000508249	TRBV23-1	A0A0A0MS06	115 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249		A0A1W2PPH5	198 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	OR2AT4	A6NND4	320 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	SLC1A7	O00341	560 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	DVL1	O14640	695 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	MAGEB3	O15480	346 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	OGG1	O15527	345 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	AKR7A2	O43488	359 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	NXPH2	O95156	264 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	ZFPL1	O95159	310 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	GNAO1	P09471	354 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	MYF6	P23409	242 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	AZGP1	P25311	298 aa	Known RBP	7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	ETV1	P50549	477 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	BMX	P51813	675 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	AQP4	P55087	323 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	UBE2V2	Q15819	145 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	YIF1B	Q5BJH7	314 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	VAX1	Q5SQQ9	334 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	C6orf141	Q5SZD1	244 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	LYPD2	Q6UXB3	125 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	ACP7	Q6ZNF0	438 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	CMTM4	Q8IZR5	234 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	ZNF561	Q8N587	486 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	BPIFB6	Q8NFQ5	453 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	C8orf46	Q8TAG6	207 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	TBC1D15	Q8TC07	691 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	TSEN15	Q8WW01	171 aa	Known RBP	7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	ADAT3	Q96EY9	351 aa	Predicted RBP	7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	SDSL	Q96GA7	329 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	CEP19	Q96LK0	163 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	MS4A7	Q9GZW8	240 aa	Predicted RBP	7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	FAM234A	Q9H0X4	552 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	PPP1R3E	Q9H7J1	279 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	ISG20L2	Q9H9L3	353 aa	Known RBP	7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	HES4	Q9HCC6	221 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	FKBP14	Q9NWM8	211 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	CTSZ	Q9UBR2	303 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	GLS2	Q9UI32	602 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	BLOC1S6	Q9UL45	172 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	RAB26	Q9ULW5	256 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	PCDHGB5	Q9Y5G0	923 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	KPTN	Q9Y664	436 aa		7.58	□□□□□ -1.2
UBE2D3-223	ENST00000508249	HYDIN	Q4G0P3	5121 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	FAM230A	A0A1W2PPH8	454 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	ZNF879	B4DU55	563 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	SULT1B1	O43704	296 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	RHBDL1	O75783	438 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	ATP6V1G2	O95670	118 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	PSG2	P11465	335 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	RAB3A	P20336	220 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	VHL	P40337	213 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	MTCP1	P56278	107 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	WNT4	P56705	351 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	ERVK11-1	P61568	191 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	ACSM1	Q08AH1	577 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	PDCD1	Q15116	288 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	METTL11B	Q5VVY1	283 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	DMKN	Q6E0U4	476 aa	Predicted RBP	7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	IZUMO2	Q6UXV1	221 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	BRD3OS	Q6XYD6	125 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	AHSA2	Q719I0	299 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	SAXO1	Q8IYX7	474 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	RDH10	Q8IZV5	341 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	C19orf18	Q8NEA5	215 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	PPP1R35	Q8TAP8	253 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	TRMT10A	Q8TBZ6	339 aa	Known RBP	7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	NRG4	Q8WWG1	115 aa		7.57	□□□□□ -1.2
UBE2D3-223	ENST00000508249	ST8SIA4	Q92187	359 aa		7.57	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms