RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 PRKACAP17612 351 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 DNASE1P24855 282 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 SNU13P55769 128 aaKnown RBP11.9□□□□□ -0.5
RNF4-208ENST00000507247 FGF12P61328 243 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 GPR176Q14439 515 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 DEFB113Q30KQ7 82 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 SFRP4Q6FHJ7 346 aaPredicted RBP11.9□□□□□ -0.5
RNF4-208ENST00000507247 BIVMQ86UB2 503 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 Q8IYB0 196 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 C1orf87Q8N0U7 546 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 FAM58AQ8N1B3 248 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 ZNF525Q8N782 197 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 KCNG3Q8TAE7 436 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 SLC25A38Q96DW6 304 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 CHODLQ9H9P2 273 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 BEX4Q9NWD9 120 aaPredicted RBP11.9□□□□□ -0.5
RNF4-208ENST00000507247 COMMD3Q9UBI1 195 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 FBLN5Q9UBX5 448 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 NPTNQ9Y639 398 aa11.9□□□□□ -0.5
RNF4-208ENST00000507247 A0A075B6Q4 140 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 A0A0A6YYD4 124 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 TFF1P04155 84 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 GTF2F2P13984 249 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 CEBPDP49716 269 aaPredicted RBP11.89□□□□□ -0.51
RNF4-208ENST00000507247 CAPZA1P52907 286 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 RBM11P57052 281 aaKnown RBP11.89□□□□□ -0.51
RNF4-208ENST00000507247 SCAND1P57086 179 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 DYNC1I2Q13409 638 aaKnown RBP11.89□□□□□ -0.51
RNF4-208ENST00000507247 CARTPTQ16568 116 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 PIGYQ3MUY2 71 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 ZNF404Q494X3 552 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 TEX36Q5VZQ5 186 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 OSR2Q8N2R0 312 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 OR51T1Q8NGJ9 327 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 MCFD2Q8NI22 146 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 ACOT12Q8WYK0 555 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 AP3S1Q92572 193 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 Q96M66 194 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 GAL3ST1Q99999 423 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 NICN1Q9BSH3 213 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 MRI1Q9BV20 369 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 TMEM59Q9BXS4 323 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 CST11Q9H112 138 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 LPAR5Q9H1C0 372 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 RHOFQ9HBH0 211 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 RASL12Q9NYN1 266 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 ZNF581Q9P0T4 197 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 NLKQ9UBE8 527 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 EDARQ9UNE0 448 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 ETV7Q9Y603 341 aa11.89□□□□□ -0.51
RNF4-208ENST00000507247 PPIAL4EA0A075B759 164 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 OOEPA6NGQ2 149 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 CLDN25C9JDP6 229 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 PPIAL4DF5H284 164 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 LGALS8O00214 317 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 CTDSP2O14595 271 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 HPGDSO60760 199 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 IGHV2-70P01814 119 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 PPIAL4FP0DN26 164 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 RAB6AP20340 208 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 DUSP1P28562 367 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 RANBP1P43487 201 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 RPS27AP62979 156 aaKnown RBP11.88□□□□□ -0.51
RNF4-208ENST00000507247 PDCD1Q15116 288 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 ZMYND11Q15326 602 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 SMIM21Q3B7S5 101 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 AVPI1Q5T686 147 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 MZT2AQ6P582 158 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 CDH24Q86UP0 819 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 FAM90A1Q86YD7 464 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 SAMD12Q8N8I0 201 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 DEFB108BQ8NET1 73 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 OR5T2Q8NGG2 359 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 NINJ1Q92982 152 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 MBD6Q96DN6 1003 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 CYYR1Q96J86 154 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 TM2D1Q9BX74 207 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 SELENOIQ9C0D9 397 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 MIXL1Q9H2W2 232 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 BARX1Q9HBU1 254 aaPredicted RBP11.88□□□□□ -0.51
RNF4-208ENST00000507247 MYOZ1Q9NP98 299 aaPredicted RBP11.88□□□□□ -0.51
RNF4-208ENST00000507247 PCDHB16Q9NRJ7 776 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 DNAJB11Q9UBS4 358 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 RAB22AQ9UL26 194 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 ST3GAL6Q9Y274 331 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 WIPI2Q9Y4P8 454 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 PPIAL4AQ9Y536 164 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 ARID1AO14497 2285 aa11.88□□□□□ -0.51
RNF4-208ENST00000507247 IGKV1D-17A0A075B6S4 117 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 GEMIN2O14893 280 aaKnown RBP11.87□□□□□ -0.51
RNF4-208ENST00000507247 PPIHO43447 177 aaKnown RBP11.87□□□□□ -0.51
RNF4-208ENST00000507247 KNG1P01042 644 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 EIF4EP06730 217 aaKnown RBP11.87□□□□□ -0.51
RNF4-208ENST00000507247 PSG2P11465 335 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 AMY2BP19961 511 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 PDLIM4P50479 330 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 BMXP51813 675 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 BTG1P62324 171 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 IL13RA2Q14627 380 aa11.87□□□□□ -0.51
RNF4-208ENST00000507247 ZNF146Q15072 292 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms