RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SNCBQ16143 134 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 KLHL12Q53G59 568 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 CEP78Q5JTW2 689 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 PAGE3Q5JUK9 113 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 TBPL2Q6SJ96 375 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 LINC00322Q6ZN03 302 aaPredicted RBP5.51□□□□□ -1.53
VCAN-207ENST00000507162 TCF23Q7RTU1 214 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 DCXRQ7Z4W1 244 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 ADCK1Q86TW2 530 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 RTN4RL2Q86UN3 420 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 ZDHHC21Q8IVQ6 265 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 ZDHHC23Q8IYP9 409 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 PGAM4Q8N0Y7 254 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 PHLDA1Q8WV24 401 aaPredicted RBP5.51□□□□□ -1.53
VCAN-207ENST00000507162 HPSE2Q8WWQ2 592 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 RPEQ96AT9 228 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 CREB3L1Q96BA8 519 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 RNF183Q96D59 192 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 KCNJ15Q99712 375 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 CHCHD6Q9BRQ6 235 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 POLR2J2Q9GZM3 115 aaKnown RBP5.51□□□□□ -1.53
VCAN-207ENST00000507162 POLR2J3Q9H1A7 115 aaKnown RBP5.51□□□□□ -1.53
VCAN-207ENST00000507162 ABCG5Q9H222 651 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 OR51J1Q9H342 316 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 CCDC134Q9H6E4 229 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 ABCB9Q9NP78 766 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 SCRT2Q9NQ03 307 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 RPRD1BQ9NQG5 326 aaKnown RBP5.51□□□□□ -1.53
VCAN-207ENST00000507162 RHCGQ9UBD6 479 aa5.51□□□□□ -1.53
VCAN-207ENST00000507162 PKD1P98161 4303 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 IGHV4OR15-8A0A075B7B6 117 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 A0A087WW49 117 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 SHISA3A0PJX4 238 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 TRPC5OSA6NMA1 111 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 OOSP1A8MZH6 123 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 H0Y980 276 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 LY6LH3BQJ8 138 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 UBDO15205 165 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 NDUFB2O95178 105 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 CST4P01036 141 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 IGLV1-47P01700 117 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 RHCEP18577 417 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 CFL1P23528 166 aaKnown RBP5.5□□□□□ -1.53
VCAN-207ENST00000507162 CDK2P24941 298 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 ACKR3P25106 362 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 OTX1P32242 354 aaPredicted RBP5.5□□□□□ -1.53
VCAN-207ENST00000507162 RPS6KA3P51812 740 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 MEF2CQ06413 473 aaPredicted RBP5.5□□□□□ -1.53
VCAN-207ENST00000507162 CKAP4Q07065 602 aaKnown RBP5.5□□□□□ -1.53
VCAN-207ENST00000507162 OR52W1Q6IF63 320 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 ZNF730Q6ZMV8 503 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 MOB3CQ70IA8 216 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 RRM2BQ7LG56 351 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 DEFB125Q8N687 156 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 UBLCP1Q8WVY7 318 aaPredicted RBP5.5□□□□□ -1.53
VCAN-207ENST00000507162 RASSF5Q8WWW0 418 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 TOMM40LQ969M1 308 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 UTP4Q969X6 686 aaKnown RBP5.5□□□□□ -1.53
VCAN-207ENST00000507162 ERMAPQ96PL5 475 aaPredicted RBP5.5□□□□□ -1.53
VCAN-207ENST00000507162 NMNAT3Q96T66 252 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 FNDC11Q9BVV2 318 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 OR10A2Q9H208 303 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 FN3KQ9H479 309 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 RABEP2Q9H5N1 569 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 ZNF286AQ9HBT8 521 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 NRIP3Q9NQ35 241 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 SDR39U1Q9NRG7 319 aaPredicted RBP5.5□□□□□ -1.53
VCAN-207ENST00000507162 MRPL22Q9NWU5 206 aaKnown RBP5.5□□□□□ -1.53
VCAN-207ENST00000507162 ING3Q9NXR8 418 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 DNAJC27Q9NZQ0 273 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 WSB1Q9Y6I7 421 aa5.5□□□□□ -1.53
VCAN-207ENST00000507162 HSD11B1P28845 292 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 RAB9AP51151 201 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 CFHR3Q02985 330 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 STX3Q13277 289 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 KPNB1Q14974 876 aaKnown RBP5.49□□□□□ -1.53
VCAN-207ENST00000507162 HLA-DRB5Q30154 266 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 CEACAM21Q3KPI0 293 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 MOB3BQ86TA1 216 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 KIRREL3Q8IZU9 778 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 POC1AQ8NBT0 407 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 OR4K13Q8NH42 304 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 MYOZ3Q8TDC0 251 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 ZBTB9Q96C00 473 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 SLAMF6Q96DU3 332 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 PGAM5Q96HS1 289 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 RASL11BQ9BPW5 248 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 OVOL2Q9BRP0 275 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 CHST6Q9GZX3 395 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 ZNF319Q9P2F9 582 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 BAG5Q9UL15 447 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 LINC00312Q9Y6C7 94 aa5.49□□□□□ -1.53
VCAN-207ENST00000507162 A0A087WUU8 490 aa5.48□□□□□ -1.53
VCAN-207ENST00000507162 TRBV5-3A0A0A0MS03 114 aa5.48□□□□□ -1.53
VCAN-207ENST00000507162 IGHV3-72A0A0B4J1Y9 119 aa5.48□□□□□ -1.53
VCAN-207ENST00000507162 G3V318 75 aa5.48□□□□□ -1.53
VCAN-207ENST00000507162 SHOXO15266 292 aa5.48□□□□□ -1.53
VCAN-207ENST00000507162 RGS11O94810 467 aa5.48□□□□□ -1.53
VCAN-207ENST00000507162 TPPPO94811 219 aa5.48□□□□□ -1.53
VCAN-207ENST00000507162 INMTO95050 263 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms