RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 FSTP19883 344 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 GATA3P23771 443 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 GABRA2P47869 451 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 IL13RA1P78552 427 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 DGUOKQ16854 277 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 MKXQ8IYA7 352 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 ST8SIA4Q92187 359 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 TMED9Q9BVK6 235 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 RBFOX1Q9NWB1 397 aaKnown RBP15.07■□□□□ 0
NPHP4-210ENST00000506941 IL36RNQ9UBH0 155 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 LPAR3Q9UBY5 353 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 METRNQ9UJH8 293 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 MAB21L2Q9Y586 359 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 J3QLI3 93 aa15.06■□□□□ 0
NPHP4-210ENST00000506941 GPX5O75715 221 aa15.06■□□□□ 0
NPHP4-210ENST00000506941 HNF1AP20823 631 aa15.06■□□□□ 0
NPHP4-210ENST00000506941 RIPPLY3P57055 190 aa15.06■□□□□ 0
NPHP4-210ENST00000506941 EMX1Q04741 257 aaPredicted RBP15.06■□□□□ 0
NPHP4-210ENST00000506941 MLLT11Q13015 90 aaPredicted RBP15.06■□□□□ 0
NPHP4-210ENST00000506941 GPR50Q13585 617 aa15.06■□□□□ 0
NPHP4-210ENST00000506941 TPBGQ13641 420 aa15.06■□□□□ 0
NPHP4-210ENST00000506941 ZNRF1Q8ND25 227 aa15.06■□□□□ 0
NPHP4-210ENST00000506941 RAB40AQ8WXH6 277 aa15.06■□□□□ 0
NPHP4-210ENST00000506941 UFD1Q92890 307 aa15.06■□□□□ 0
NPHP4-210ENST00000506941 SDSLQ96GA7 329 aa15.06■□□□□ 0
NPHP4-210ENST00000506941 NUDT16L1Q9BRJ7 211 aaKnown RBP15.06■□□□□ 0
NPHP4-210ENST00000506941 YTHDF1Q9BYJ9 559 aaKnown RBP15.06■□□□□ 0
NPHP4-210ENST00000506941 NEK6Q9HC98 313 aa15.06■□□□□ 0
NPHP4-210ENST00000506941 ISYNA1Q9NPH2 558 aa15.06■□□□□ 0
NPHP4-210ENST00000506941 ACOT13Q9NPJ3 140 aa15.06■□□□□ 0
NPHP4-210ENST00000506941 GABRPO00591 440 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 NDUFB3O43676 98 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 KNG1P01042 644 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 CALCBP10092 127 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 ADRA2CP18825 462 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 PRDX2P32119 198 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 PPP3R1P63098 170 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 PAX8Q06710 450 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 FAM27D1Q5T7N8 215 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 UNQ9370/PRO34162Q6UXP9 181 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 BTN2A1Q7KYR7 527 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 C1QL2Q7Z5L3 287 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 SATL1Q86VE3 508 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 EMG1Q92979 244 aaKnown RBP15.05■□□□□ -0
NPHP4-210ENST00000506941 POM121Q96HA1 1249 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 MED30Q96HR3 178 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 MGLLQ99685 303 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 C7orf69Q9H7B7 122 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 NOX4Q9NPH5 578 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 TMEM138Q9NPI0 162 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 OR14J1Q9UGF5 321 aa15.05■□□□□ -0
NPHP4-210ENST00000506941 KIR2DS1A0A191URI9 304 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 MRPS14O60783 128 aaKnown RBP15.04■□□□□ -0
NPHP4-210ENST00000506941 SC5DO75845 299 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 KDM4BO94953 1096 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 CYB5AP00167 134 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 ALDOBP05062 364 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 SFTPBP07988 381 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 CPEP16870 476 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 BDKRB2P30411 391 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 TGFBR2P37173 567 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 GP2P55259 537 aaKnown RBP15.04■□□□□ -0
NPHP4-210ENST00000506941 RPS25P62851 125 aaKnown RBP15.04■□□□□ -0
NPHP4-210ENST00000506941 ACSM3Q53FZ2 586 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 LRRC10Q5BKY1 277 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 DDI2Q5TDH0 399 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 CD276Q5ZPR3 534 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 ZNF367Q7RTV3 350 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 Q8IYB0 196 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 SAXO1Q8IYX7 474 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 SPARTQ8N0X7 666 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 FAM58AQ8N1B3 248 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 MS4A15Q8N5U1 240 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 ELL3Q9HB65 397 aaPredicted RBP15.04■□□□□ -0
NPHP4-210ENST00000506941 CKLFQ9UBR5 152 aa15.04■□□□□ -0
NPHP4-210ENST00000506941 SLC25A10Q9UBX3 287 aaPredicted RBP15.04■□□□□ -0
NPHP4-210ENST00000506941 RPUSD1Q9UJJ7 312 aaKnown RBP15.04■□□□□ -0
NPHP4-210ENST00000506941 MAGEB3O15480 346 aa15.03■□□□□ -0
NPHP4-210ENST00000506941 ENSAO43768 121 aaKnown RBP15.03■□□□□ -0
NPHP4-210ENST00000506941 FAM157CP0CG43 387 aa15.03■□□□□ -0
NPHP4-210ENST00000506941 TMEM225BP0DP42 221 aa15.03■□□□□ -0
NPHP4-210ENST00000506941 PRKACAP17612 351 aa15.03■□□□□ -0
NPHP4-210ENST00000506941 SRD5A1P18405 259 aa15.03■□□□□ -0
NPHP4-210ENST00000506941 OR3A4PP47883 348 aa15.03■□□□□ -0
NPHP4-210ENST00000506941 CAV3P56539 151 aa15.03■□□□□ -0
NPHP4-210ENST00000506941 PHC2Q8IXK0 858 aa15.03■□□□□ -0
NPHP4-210ENST00000506941 ZSCAN4Q8NAM6 433 aaPredicted RBP15.03■□□□□ -0
NPHP4-210ENST00000506941 TMEM185AQ8NFB2 350 aa15.03■□□□□ -0
NPHP4-210ENST00000506941 TMEM203Q969S6 136 aa15.03■□□□□ -0
NPHP4-210ENST00000506941 GPER1Q99527 375 aa15.03■□□□□ -0
NPHP4-210ENST00000506941 PPIL3Q9H2H8 161 aaKnown RBP15.03■□□□□ -0
NPHP4-210ENST00000506941 HMG20AQ9NP66 347 aa15.03■□□□□ -0
NPHP4-210ENST00000506941 FOXJ3Q9UPW0 622 aa15.03■□□□□ -0
NPHP4-210ENST00000506941 SF3B6Q9Y3B4 125 aaKnown RBP15.03■□□□□ -0
NPHP4-210ENST00000506941 AUP1Q9Y679 476 aa15.03■□□□□ -0
NPHP4-210ENST00000506941 ECDO95905 644 aaPredicted RBP15.02■□□□□ -0
NPHP4-210ENST00000506941 FSHBP01225 129 aa15.02■□□□□ -0
NPHP4-210ENST00000506941 MAPK3P27361 379 aaPredicted RBP15.02■□□□□ -0
NPHP4-210ENST00000506941 DUSP1P28562 367 aa15.02■□□□□ -0
NPHP4-210ENST00000506941 ZNF93P35789 620 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms