RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 OR52A1Q9UKL2 312 aa16.98■□□□□ 0.31
SQSTM1-210ENST00000506042 ODF3BA8MYP8 253 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 TTRP02766 147 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 KRT8P05787 483 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 CEBPDP49716 269 aaPredicted RBP16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 ACTA2P62736 377 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 ACTG2P63267 376 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 ACTC1P68032 377 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 ACTA1P68133 377 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 TMEM42Q69YG0 159 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 ELMOD2Q8IZ81 293 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 C11orf42Q8N5U0 333 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 BBS1Q8NFJ9 593 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 OR5AU1Q8NGC0 362 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 STMN2Q93045 179 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 SNX22Q96L94 193 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 OR5M11Q96RB7 305 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 PAPOLBQ9NRJ5 636 aaKnown RBP16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 ZMAT5Q9UDW3 170 aaKnown RBP16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 LINC00312Q9Y6C7 94 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 V9GYS6 101 aa16.97■□□□□ 0.31
SQSTM1-210ENST00000506042 FAM230AA0A1W2PPH8 454 aa16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 HTR1DP28221 377 aa16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 CEACAM3P40198 252 aa16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 CXCR4P61073 352 aa16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 HABP2Q14520 560 aaPredicted RBP16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 TRAPPC6BQ86SZ2 158 aa16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 GID4Q8IVV7 300 aa16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 ZNF596Q8TC21 504 aa16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 RCC1LQ96I51 464 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 CLEC7AQ9BXN2 247 aa16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 WNT10AQ9GZT5 417 aa16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 GAL3ST2Q9H3Q3 398 aa16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 HILPDAQ9Y5L2 63 aa16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 TSSC4Q9Y5U2 329 aaPredicted RBP16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 SESN1Q9Y6P5 492 aa16.96■□□□□ 0.31
SQSTM1-210ENST00000506042 OCM2P0CE71 109 aa16.95■□□□□ 0.3
SQSTM1-210ENST00000506042 OCMP0CE72 109 aaPredicted RBP16.95■□□□□ 0.3
SQSTM1-210ENST00000506042 PAX6P26367 422 aa16.95■□□□□ 0.3
SQSTM1-210ENST00000506042 RAB13P51153 203 aa16.95■□□□□ 0.3
SQSTM1-210ENST00000506042 FUT6P51993 359 aa16.95■□□□□ 0.3
SQSTM1-210ENST00000506042 HCCSP53701 268 aa16.95■□□□□ 0.3
SQSTM1-210ENST00000506042 EDDM3AQ14507 147 aa16.95■□□□□ 0.3
SQSTM1-210ENST00000506042 DMRTC1Q5HYR2 192 aa16.95■□□□□ 0.3
SQSTM1-210ENST00000506042 EGFL6Q8IUX8 553 aa16.95■□□□□ 0.3
SQSTM1-210ENST00000506042 SLC35F2Q8IXU6 374 aa16.95■□□□□ 0.3
SQSTM1-210ENST00000506042 NRBF2Q96F24 287 aa16.95■□□□□ 0.3
SQSTM1-210ENST00000506042 BORCS8Q96FH0 119 aa16.95■□□□□ 0.3
SQSTM1-210ENST00000506042 KRT84Q9NSB2 600 aa16.95■□□□□ 0.3
SQSTM1-210ENST00000506042 E9PQ18 207 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 M0QZK8 103 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 GABRR1P24046 479 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 CRISP1P54107 249 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 MS4A2Q01362 244 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 VAX1Q5SQQ9 334 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 FOXB2Q5VYV0 432 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 RTN4RL2Q86UN3 420 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 ADGRG5Q8IZF4 528 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 TRMT10AQ8TBZ6 339 aaKnown RBP16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 EMG1Q92979 244 aaKnown RBP16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 C10orf35Q96D05 121 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 OCSTAMPQ9BR26 566 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 TTTY10Q9BZA0 68 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 LIN7BQ9HAP6 207 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 SEBOXQ9HB31 216 aaPredicted RBP16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 NEK6Q9HC98 313 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 CLN6Q9NWW5 311 aa16.94■□□□□ 0.3
SQSTM1-210ENST00000506042 A0A1W2PRX2 142 aa16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 TCRBV4S1A1TA0A5B7 111 aa16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 SYT7O43581 403 aa16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 DLX6P56179 175 aa16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 ERVK11-1P61568 191 aa16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 MFGE8Q08431 387 aaPredicted RBP16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 GRK1Q15835 563 aa16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 NXNL2Q5VZ03 156 aa16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 TMEM236Q5W0B7 351 aa16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 MEPCEQ7L2J0 689 aaKnown RBP16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 SPATA24Q86W54 205 aa16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 YIPF7Q8N8F6 280 aa16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 OR51D1Q8NGF3 324 aa16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 OR14K1Q8NGZ2 314 aa16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 CANT1Q8WVQ1 401 aa16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 TMEM133Q9H2Q1 129 aa16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 UBE2J1Q9Y385 318 aaPredicted RBP16.93■□□□□ 0.3
SQSTM1-210ENST00000506042 TRGV10A0A0A0MS01 117 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 IGHV2-26A0A0B4J1V2 119 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 MPIG6BO95866 241 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 MNDAP41218 407 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 ATP1B3P54709 279 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 CDC42P60953 191 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 FLOT2Q14254 428 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 KHDC1LQ5JSQ8 128 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 SPIN3Q5JUX0 258 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 CCDC144NLQ6NUI1 221 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 FAM220AQ7Z4H9 259 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 ANGPTL5Q86XS5 388 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 WFDC9Q8NEX5 89 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 PP6455Q8WZ26 134 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 THTPAQ9BU02 230 aa16.92■□□□□ 0.3
SQSTM1-210ENST00000506042 MGST3O14880 152 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms