RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 TSEN15Q8WW01 171 aaKnown RBP6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 DECR2Q9NUI1 292 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 ETV7Q9Y603 341 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 IGHV4-61A0A0C4DH41 118 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 SLC33A1O00400 549 aaPredicted RBP6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 CDIPTO14735 213 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 PDCD5O14737 125 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 CYB5R3P00387 301 aaPredicted RBP6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 PSMB9P28065 219 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 RPS19P39019 145 aaKnown RBP6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 C1orf87Q8N0U7 546 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 ZNF671Q8TAW3 534 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 FAM168AQ92567 244 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 ISOC1Q96CN7 298 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 SLC25A38Q96DW6 304 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 KCTD7Q96MP8 289 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 CCDC90BQ9GZT6 254 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 A0A087X0M5 115 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 A0A1B0GX30 115 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 MMP9P14780 707 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 HAAOP46952 286 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 ATP5J2P56134 94 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 HNRNPA0Q13151 305 aaKnown RBP6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 GPR176Q14439 515 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 HFEQ30201 348 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 C22orf42Q6IC83 251 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 C1orf122Q6ZSJ8 110 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 ZNF826PQ6ZT77 177 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 CLDND2Q8NHS1 167 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 SLIRPQ9GZT3 109 aaKnown RBP6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 LPAR5Q9H1C0 372 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 ZNF665Q9H7R5 613 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 PLEKHA1Q9HB21 404 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 NLKQ9UBE8 527 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 SSR3Q9UNL2 185 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 V9GY05 133 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 RTTNQ86VV8 2226 aa6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 SPTBN1Q01082 2364 aaKnown RBP6.88□□□□□ -1.31
CDC42SE2-208ENST00000505065 SMIM31A0A1B0GVY4 71 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 K7N7A8 449 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 LY6HO94772 140 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 MELTFP08582 738 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 IL2RGP31785 369 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 ETV6P41212 452 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 ODF4Q2M2E3 257 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 LINC00299Q6ZSB3 139 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 SATL1Q86VE3 508 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 ST8SIA4Q92187 359 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 BORCS8Q96FH0 119 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 WDFY2Q96P53 400 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 BPESC1Q9GZL8 116 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 MIOXQ9UGB7 285 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 PPIAL4AQ9Y536 164 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 ITPR3Q14573 2671 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 ANK2Q01484 3957 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 A0A075B6Q4 140 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 TRAV24A0A0B4J272 114 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 A6NIN4 97 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 CDC14BO60729 498 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 DIRAS3O95661 229 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 OR3A1P47881 315 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 KCNJ3P48549 501 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 OR10A3P58181 314 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 SFXN4Q6P4A7 337 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 METAP1DQ6UB28 335 aaPredicted RBP6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 WFDC11Q8NEX6 87 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 OR11L1Q8NGX0 322 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 OR8S1Q8NH09 359 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 LRRC29Q8WV35 223 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 PRDM13Q9H4Q3 707 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 NEK6Q9HC98 313 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 CKLFQ9UBR5 152 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 A0A0A6YYH2 397 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 TMEM272A0A1B0GTI8 110 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 TMEM82A0PJX8 343 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 A6NJ64 397 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 LRRC30A6NM36 301 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 AIREO43918 545 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 RAB3BP20337 219 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 TGFBR1P36897 503 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 MTCP1P56278 107 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 PAX8Q06710 450 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 ANGPTL5Q86XS5 388 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 REG4Q9BYZ8 158 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 OR5V1Q9UGF6 321 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 TRAV38-1A0A0B4J264 116 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 CALRP27797 417 aaKnown RBP6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 HTR2CP28335 458 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 SOX2P48431 317 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 HOXA4Q00056 320 aaPredicted RBP6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 SPCS2Q15005 226 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 KCNJ8Q15842 424 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 C9orf139Q6ZV77 190 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 MBNL3Q9NUK0 354 aaKnown RBP6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 ABRACLQ9P1F3 81 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 MAB21L2Q9Y586 359 aa6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 RP1L1Q8IWN7 2480 aaPredicted RBP6.87□□□□□ -1.31
CDC42SE2-208ENST00000505065 CEACAM18A8MTB9 384 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 LYNX1G3V0Z9 82 aa6.86□□□□□ -1.31
CDC42SE2-208ENST00000505065 CD5LO43866 347 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms