RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 JAM3Q9BX67 310 aa11.17□□□□□ -0.62
HOXC6-203ENST00000504315 ERVK13-1Q9NX77 482 aa11.17□□□□□ -0.62
HOXC6-203ENST00000504315 HHLA2Q9UM44 414 aa11.17□□□□□ -0.62
HOXC6-203ENST00000504315 MYRFQ9Y2G1 1151 aa11.17□□□□□ -0.62
HOXC6-203ENST00000504315 FAM96BQ9Y3D0 163 aa11.17□□□□□ -0.62
HOXC6-203ENST00000504315 TRBV2A0A0J9YWF9 115 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 A0A1W2PPH5 198 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 J3QLW9 94 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 ALX3O95076 343 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 MT-ND2P03891 347 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 CHRM2P08172 466 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 ZNF19P17023 458 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 ATF1P18846 271 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 PRKACBP22694 351 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 AZGP1P25311 298 aaKnown RBP11.16□□□□□ -0.62
HOXC6-203ENST00000504315 ATP1B3P54709 279 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 RAG2P55895 527 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 COL10A1Q03692 680 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 MRPL28Q13084 256 aaKnown RBP11.16□□□□□ -0.62
HOXC6-203ENST00000504315 TAF9Q16594 264 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 MIDNQ504T8 468 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 PRR31Q5SQ13 230 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 LPCAT4Q643R3 524 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 TMEM200BQ69YZ2 307 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 CRIP3Q6Q6R5 217 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 LHFPL2Q6ZUX7 228 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 SLC25A26Q70HW3 274 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 LHFPL3Q86UP9 236 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 PNKDQ8N490 385 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 BEND2Q8NDZ0 799 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 OR4F5Q8NH21 305 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 SLAMF9Q96A28 289 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 FGGYQ96C11 551 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 AJUBAQ96IF1 538 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 OPALINQ96PE5 141 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 ZNF696Q9H7X3 374 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 ISG20L2Q9H9L3 353 aaKnown RBP11.16□□□□□ -0.62
HOXC6-203ENST00000504315 AMBNQ9NP70 447 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 TNFRSF19Q9NS68 423 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 SMPD3Q9NY59 655 aaPredicted RBP11.16□□□□□ -0.62
HOXC6-203ENST00000504315 OR14J1Q9UGF5 321 aa11.16□□□□□ -0.62
HOXC6-203ENST00000504315 SF3B6Q9Y3B4 125 aaKnown RBP11.16□□□□□ -0.62
HOXC6-203ENST00000504315 RPL36Q9Y3U8 105 aaKnown RBP11.16□□□□□ -0.62
HOXC6-203ENST00000504315 PKD1L1Q8TDX9 2849 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 MEIOCA2RUB1 952 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 TMEM212A6NML5 194 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 C17orf98A8MV24 154 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 H0YAE9 185 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 GPR137BO60478 399 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 WBP4O75554 376 aaKnown RBP11.15□□□□□ -0.62
HOXC6-203ENST00000504315 RBP4P02753 201 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 CRYBA1P05813 215 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 RPSAP08865 295 aaKnown RBP11.15□□□□□ -0.62
HOXC6-203ENST00000504315 ZNF20P17024 532 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 OMGP23515 440 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 DLX6P56179 175 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 ZNF273Q14593 569 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 ZNF146Q15072 292 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 GDPGP1Q6ZNW5 385 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 MKXQ8IYA7 352 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 OR8H2Q8N162 312 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 OR4M1Q8NGD0 313 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 OR52I1Q8NGK6 324 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 HAVCR2Q8TDQ0 301 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 WFDC12Q8WWY7 111 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 BEX1Q9HBH7 125 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 VPREB3Q9UKI3 123 aa11.15□□□□□ -0.62
HOXC6-203ENST00000504315 CLPSL1A2RUU4 121 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 ANGPTL7O43827 346 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 ZFPL1O95159 310 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 CCL3L1P16619 93 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 MTCP1P56278 107 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 PDZK1IP1Q13113 114 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 KLHL22Q53GT1 634 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 SPIN3Q5JUX0 258 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 ZNF691Q5VV52 312 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 OLFML2AQ68BL7 652 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 C17orf107Q6ZR85 190 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 TCF23Q7RTU1 214 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 FAM58AQ8N1B3 248 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 PARP16Q8N5Y8 322 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 ASCC1Q8N9N2 400 aaKnown RBP11.14□□□□□ -0.63
HOXC6-203ENST00000504315 ZSCAN4Q8NAM6 433 aaPredicted RBP11.14□□□□□ -0.63
HOXC6-203ENST00000504315 OR13C3Q8NGS6 347 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 OR5R1Q8NH85 324 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 EMG1Q92979 244 aaKnown RBP11.14□□□□□ -0.63
HOXC6-203ENST00000504315 SNX22Q96L94 193 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 MEGF9Q9H1U4 602 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 FGF20Q9NP95 211 aaPredicted RBP11.14□□□□□ -0.63
HOXC6-203ENST00000504315 C8orf4Q9NR00 106 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 RBFOX1Q9NWB1 397 aaKnown RBP11.14□□□□□ -0.63
HOXC6-203ENST00000504315 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.14□□□□□ -0.63
HOXC6-203ENST00000504315 IL36RNQ9UBH0 155 aa11.14□□□□□ -0.63
HOXC6-203ENST00000504315 TET2Q6N021 2002 aaPredicted RBP11.13□□□□□ -0.63
HOXC6-203ENST00000504315 hCG_1809904A0A1W2PP81 198 aa11.13□□□□□ -0.63
HOXC6-203ENST00000504315 A0A1W2PPE2 198 aa11.13□□□□□ -0.63
HOXC6-203ENST00000504315 A0A1W2PR64 198 aa11.13□□□□□ -0.63
HOXC6-203ENST00000504315 A0A1W2PRD5 423 aa11.13□□□□□ -0.63
HOXC6-203ENST00000504315 A0A1W2PRF3 423 aa11.13□□□□□ -0.63
HOXC6-203ENST00000504315 A0A1W2PRM7 423 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms