RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 KRTAP10-3P60369 221 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 SNRPGP62308 76 aaKnown RBP9.74□□□□□ -0.85
MED28-203ENST00000503945 ACTC1P68032 377 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 ACTA1P68133 377 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 ZNF85Q03923 595 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 CNN3Q15417 329 aaKnown RBP9.74□□□□□ -0.85
MED28-203ENST00000503945 AANATQ16613 207 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 ZIK1Q3SY52 487 aaPredicted RBP9.74□□□□□ -0.85
MED28-203ENST00000503945 HCP5Q6MZN7 132 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 CCDC121Q6ZUS5 278 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 SLC25A26Q70HW3 274 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 Q8IYB0 196 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 ENTHD1Q8IYW4 607 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 C11orf42Q8N5U0 333 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 ACBD7Q8N6N7 88 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 ASCC1Q8N9N2 400 aaKnown RBP9.74□□□□□ -0.85
MED28-203ENST00000503945 PP6455Q8WZ26 134 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 SLAMF9Q96A28 289 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 FGGYQ96C11 551 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 RNFT2Q96EX2 444 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 MRPL48Q96GC5 212 aaKnown RBP9.74□□□□□ -0.85
MED28-203ENST00000503945 Q96MT0 163 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 CHST5Q9GZS9 411 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 FRRS1LQ9P0K9 344 aa9.74□□□□□ -0.85
MED28-203ENST00000503945 H3BUX3 64 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 J3QLW9 94 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 SLC16A6O15403 523 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 ISG15P05161 165 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 RPSAP08865 295 aaKnown RBP9.73□□□□□ -0.85
MED28-203ENST00000503945 ZNF728P0DKX0 622 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 PIPP12273 146 aaPredicted RBP9.73□□□□□ -0.85
MED28-203ENST00000503945 CCL3L1P16619 93 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 ZNF19P17023 458 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 ZNF20P17024 532 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 PRKACBP22694 351 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 EDDM3BP56851 147 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 OR12D2P58182 307 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 PROK1P58294 105 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 KPNB1Q14974 876 aaKnown RBP9.73□□□□□ -0.85
MED28-203ENST00000503945 LRRC75BQ2VPJ9 315 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 DNAAF1Q8NEP3 725 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 OR13D1Q8NGV5 346 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 OR2G2Q8NGZ5 317 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 C17orf50Q8WW18 174 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 SNX22Q96L94 193 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 SEBOXQ9HB31 216 aaPredicted RBP9.73□□□□□ -0.85
MED28-203ENST00000503945 RAB18Q9NP72 206 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 FBLN5Q9UBX5 448 aa9.73□□□□□ -0.85
MED28-203ENST00000503945 IGKV1-27A0A075B6S5 117 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 LOC107986453A0A1B0GWG9 222 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 hADV38S2A0JD32 116 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 C17orf98A8MV24 154 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 F8VVB4 439 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 F8VWA3 439 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 H3BUI4 141 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 EI24O14681 340 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 MPZL2O60487 215 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 HTR1AP08908 422 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 ATF1P18846 271 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 COX7A1P24310 79 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 PEX2P28328 305 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 GABRA5P31644 462 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 KIR2DS4P43632 304 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 CCR9P51686 369 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 ISL1P61371 349 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 MEF2CQ06413 473 aaPredicted RBP9.72□□□□□ -0.85
MED28-203ENST00000503945 LY6EQ16553 131 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 ASPHD2Q6ICH7 369 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 FDX2Q6P4F2 183 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 FAM58AQ8N1B3 248 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 CBR4Q8N4T8 237 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 PPP1R35Q8TAP8 253 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 EMG1Q92979 244 aaKnown RBP9.72□□□□□ -0.85
MED28-203ENST00000503945 MALSU1Q96EH3 234 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 NEK6Q9HC98 313 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 HHLA2Q9UM44 414 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 EXOGQ9Y2C4 368 aaKnown RBP9.72□□□□□ -0.85
MED28-203ENST00000503945 GMPPBQ9Y5P6 360 aa9.72□□□□□ -0.85
MED28-203ENST00000503945 J3QRE1 110 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 SH2D1BO14796 132 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 ZNF737O75373 536 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 FADS2O95864 444 aaKnown RBP9.71□□□□□ -0.86
MED28-203ENST00000503945 HAND1O96004 215 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 ARG1P05089 322 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 GABRR1P24046 479 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 KIR3DL2P43630 455 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 PDZK1IP1Q13113 114 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 ZNF273Q14593 569 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 ZNF782Q6ZMW2 699 aaPredicted RBP9.71□□□□□ -0.86
MED28-203ENST00000503945 ZBTB49Q6ZSB9 765 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 LHFPL2Q6ZUX7 228 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 UTS2BQ765I0 119 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 LHFPL3Q86UP9 236 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 OR8H2Q8N162 312 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 ZNF676Q8N7Q3 588 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 SPSB1Q96BD6 273 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 ADAT3Q96EY9 351 aaPredicted RBP9.71□□□□□ -0.86
MED28-203ENST00000503945 AJUBAQ96IF1 538 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 C9orf16Q9BUW7 83 aa9.71□□□□□ -0.86
MED28-203ENST00000503945 MMP27Q9H306 513 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms