RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 GMPPBQ9Y5P6 360 aa6.92□□□□□ -1.3
HMGXB4-207ENST00000498212 TET2Q6N021 2002 aaPredicted RBP6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 H3BUX3 64 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 J3QLW9 94 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 J3QRE1 110 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 K7N7A8 449 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 SLC16A6O15403 523 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 INMTO95050 263 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 ISG15P05161 165 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 CHRM2P08172 466 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 PIPP12273 146 aaPredicted RBP6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 CCL3L1P16619 93 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 ZNF19P17023 458 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 ZNF20P17024 532 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 TGFBR2P37173 567 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 RBP2P50120 134 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 ATP1B3P54709 279 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 OR12D2P58182 307 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 ERVFRD-1P60508 538 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 ACTA2P62736 377 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 ACTG2P63267 376 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 SRSF4Q08170 494 aaKnown RBP6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 ZNF273Q14593 569 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 FDX2Q6P4F2 183 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 BRICD5Q6PL45 260 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 Q6ZSV7 163 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 GDPD3Q7L5L3 318 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 EGFL6Q8IUX8 553 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 Q8IYB0 196 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 ENTHD1Q8IYW4 607 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 C11orf42Q8N5U0 333 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 ACBD7Q8N6N7 88 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 ZSCAN4Q8NAM6 433 aaPredicted RBP6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 BEND2Q8NDZ0 799 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 DNAAF1Q8NEP3 725 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 LINC01006Q8NI28 216 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 C17orf50Q8WW18 174 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 ADAT3Q96EY9 351 aaPredicted RBP6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 MRPL48Q96GC5 212 aaKnown RBP6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 C4orf36Q96KX1 117 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 MYCBPQ99417 103 aaPredicted RBP6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 CITED1Q99966 193 aa6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 EXOGQ9Y2C4 368 aaKnown RBP6.91□□□□□ -1.3
HMGXB4-207ENST00000498212 IGKV1-9A0A0C4DH69 117 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 C17orf98A8MV24 154 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 F8VVB4 439 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 F8VWA3 439 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 EBAG9O00559 213 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 MPZL2O60487 215 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 ZNF737O75373 536 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 CLPXO76031 633 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 CYB5AP00167 134 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 OCM2P0CE71 109 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 OCMP0CE72 109 aaPredicted RBP6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 DBTP11182 482 aaKnown RBP6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 GABRB1P18505 474 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 ATF1P18846 271 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 PRKACBP22694 351 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 AZGP1P25311 298 aaKnown RBP6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 POU3F4P49335 361 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 CCR9P51686 369 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 BMXP51813 675 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 MTCP1P56278 107 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 LGALS4P56470 323 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 EDDM3BP56851 147 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 PROK1P58294 105 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 NANOS3P60323 173 aaKnown RBP6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 ZNF91Q05481 1191 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 ALKBH1Q13686 389 aaKnown RBP6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 GALEQ14376 348 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 ZNF782Q6ZMW2 699 aaPredicted RBP6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 ZBTB49Q6ZSB9 765 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 LHFPL2Q6ZUX7 228 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 UTS2BQ765I0 119 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 LHFPL3Q86UP9 236 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 OR8H2Q8N162 312 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 OR13C3Q8NGS6 347 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 EMG1Q92979 244 aaKnown RBP6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 SPSB1Q96BD6 273 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 FGGYQ96C11 551 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 LGALS12Q96DT0 336 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 PELI1Q96FA3 418 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 SNX22Q96L94 193 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 Q96MT0 163 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 SLC29A1Q99808 456 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 SSX3Q99909 188 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 ALG8Q9BVK2 526 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 MEGF9Q9H1U4 602 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 PPA2Q9H2U2 334 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 C16orf95Q9H693 158 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 S100A14Q9HCY8 104 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 AASSQ9UDR5 926 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 HHLA2Q9UM44 414 aa6.9□□□□□ -1.3
HMGXB4-207ENST00000498212 TRBV2A0A0J9YWF9 115 aa6.89□□□□□ -1.31
HMGXB4-207ENST00000498212 LOC100130705A0A1B0GUX0 176 aa6.89□□□□□ -1.31
HMGXB4-207ENST00000498212 TIMM23O14925 209 aa6.89□□□□□ -1.31
HMGXB4-207ENST00000498212 TSPAN9O75954 239 aa6.89□□□□□ -1.31
HMGXB4-207ENST00000498212 FADS2O95864 444 aaKnown RBP6.89□□□□□ -1.31
HMGXB4-207ENST00000498212 HAND1O96004 215 aa6.89□□□□□ -1.31
HMGXB4-207ENST00000498212 IGHA1P01876 353 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms