RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 BCL3P20749 454 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 USF1P22415 310 aaPredicted RBP16.77■□□□□ 0.28
CTSD-206ENST00000497544 NPBWR2P48146 333 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 MTNR1BP49286 362 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 ERVK11-1P61568 191 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 RSU1Q15404 277 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 TMEM155Q4W5P6 130 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 TEX36Q5VZQ5 186 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 ACP7Q6ZNF0 438 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 C1QL2Q7Z5L3 287 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 TPRA1Q86W33 373 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 SPICQ8N5J4 248 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 SEH1LQ96EE3 360 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 RNF167Q9H6Y7 350 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 RHOFQ9HBH0 211 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 PLGRKTQ9HBL7 147 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 PCDHB16Q9NRJ7 776 aa16.77■□□□□ 0.28
CTSD-206ENST00000497544 MRPS28Q9Y2Q9 187 aaKnown RBP16.77■□□□□ 0.28
CTSD-206ENST00000497544 SHISA3A0PJX4 238 aa16.76■□□□□ 0.27
CTSD-206ENST00000497544 NDUFA2O43678 99 aa16.76■□□□□ 0.27
CTSD-206ENST00000497544 KDM4BO94953 1096 aa16.76■□□□□ 0.27
CTSD-206ENST00000497544 CDRT1O95170 752 aa16.76■□□□□ 0.27
CTSD-206ENST00000497544 CSTBP04080 98 aaKnown RBP16.76■□□□□ 0.27
CTSD-206ENST00000497544 RANBP1P43487 201 aa16.76■□□□□ 0.27
CTSD-206ENST00000497544 SMIM21Q3B7S5 101 aa16.76■□□□□ 0.27
CTSD-206ENST00000497544 ZNF404Q494X3 552 aa16.76■□□□□ 0.27
CTSD-206ENST00000497544 AWAT2Q6E213 333 aa16.76■□□□□ 0.27
CTSD-206ENST00000497544 FIP1L1Q6UN15 594 aaKnown RBP16.76■□□□□ 0.27
CTSD-206ENST00000497544 OR5T2Q8NGG2 359 aa16.76■□□□□ 0.27
CTSD-206ENST00000497544 EMG1Q92979 244 aaKnown RBP16.76■□□□□ 0.27
CTSD-206ENST00000497544 C12orf43Q96C57 262 aaKnown RBP16.76■□□□□ 0.27
CTSD-206ENST00000497544 TMEM246Q9BRR3 403 aa16.76■□□□□ 0.27
CTSD-206ENST00000497544 NLKQ9UBE8 527 aa16.76■□□□□ 0.27
CTSD-206ENST00000497544 DOCK11Q5JSL3 2073 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 IGHV4-61A0A0C4DH41 118 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.75■□□□□ 0.27
CTSD-206ENST00000497544 HTR3BO95264 441 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 GYPAP02724 150 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 CD37P11049 281 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 HTR2CP28335 458 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 SDC2P34741 201 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 GPR176Q14439 515 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 C1orf100Q5SVJ3 147 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 GLIPR1L1Q6UWM5 242 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 ASCL4Q6XD76 172 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 LYPD6Q86Y78 171 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 FAM90A1Q86YD7 464 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 FAM58AQ8N1B3 248 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 OR4D6Q8NGJ1 314 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 CLDND2Q8NHS1 167 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 GFI1Q99684 422 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 HES4Q9HCC6 221 aa16.75■□□□□ 0.27
CTSD-206ENST00000497544 SONP18583 2426 aaKnown RBP16.75■□□□□ 0.27
CTSD-206ENST00000497544 OR2AT4A6NND4 320 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 F8VVB4 439 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 F8VWA3 439 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 H7C1Q1 480 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 ZNF780AO75290 641 aaPredicted RBP16.74■□□□□ 0.27
CTSD-206ENST00000497544 SFTPBP07988 381 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 CALCBP10092 127 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 PRKACAP17612 351 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 GABRA2P47869 451 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 BMXP51813 675 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 MXD1Q05195 221 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 LOXL1Q08397 574 aaPredicted RBP16.74■□□□□ 0.27
CTSD-206ENST00000497544 DCDC5Q6ZRR9 648 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 CLVS1Q8IUQ0 354 aaPredicted RBP16.74■□□□□ 0.27
CTSD-206ENST00000497544 OR6M1Q8NGM8 313 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 OR10K1Q8NGX5 313 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 NAA50Q9GZZ1 169 aaKnown RBP16.74■□□□□ 0.27
CTSD-206ENST00000497544 RBFOX1Q9NWB1 397 aaKnown RBP16.74■□□□□ 0.27
CTSD-206ENST00000497544 GHRLQ9UBU3 117 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 MIOXQ9UGB7 285 aa16.74■□□□□ 0.27
CTSD-206ENST00000497544 SMIM30A4D0T7 59 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 RFPL4AA6NLU0 287 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 RFPL4AL1F8VTS6 287 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 SLC17A2O00624 439 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 KNG1P01042 644 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 PSG2P11465 335 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 SERPINA2P20848 420 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 OR10A3P58181 314 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 VBP1P61758 197 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 RAB11BQ15907 218 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 SLC22A6Q4U2R8 563 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 RAB39BQ96DA2 213 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 PATZ1Q9HBE1 687 aaKnown RBP16.73■□□□□ 0.27
CTSD-206ENST00000497544 HMG20AQ9NP66 347 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 IL36GQ9NZH8 169 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 OR14J1Q9UGF5 321 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 GLS2Q9UI32 602 aa16.73■□□□□ 0.27
CTSD-206ENST00000497544 CEACAM18A8MTB9 384 aa16.72■□□□□ 0.27
CTSD-206ENST00000497544 NOTOA8MTQ0 251 aa16.72■□□□□ 0.27
CTSD-206ENST00000497544 SLC22A1O15245 554 aa16.72■□□□□ 0.27
CTSD-206ENST00000497544 ADAM20O43506 726 aa16.72■□□□□ 0.27
CTSD-206ENST00000497544 GABARAPO95166 117 aa16.72■□□□□ 0.27
CTSD-206ENST00000497544 UBBP0CG47 229 aa16.72■□□□□ 0.27
CTSD-206ENST00000497544 RPS2P15880 293 aaKnown RBP16.72■□□□□ 0.27
CTSD-206ENST00000497544 TGFBR1P36897 503 aa16.72■□□□□ 0.27
CTSD-206ENST00000497544 SNU13P55769 128 aaKnown RBP16.72■□□□□ 0.27
CTSD-206ENST00000497544 FGF12P61328 243 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms