RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 FAM3DQ96BQ1 224 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ECHDC3Q96DC8 303 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 SERPINB11Q96P15 392 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 PANX1Q96RD7 426 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 TGS1Q96RS0 853 aaKnown RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 SERPINI1Q99574 410 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 DOK1Q99704 481 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ZNF251Q9BRH9 671 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 PDCD10Q9BUL8 212 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 MND1Q9BWT6 205 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 LHX5Q9H2C1 402 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 CRLF2Q9HC73 371 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 FGF20Q9NP95 211 aaPredicted RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 ZDHHC4Q9NPG8 344 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 RPRD1BQ9NQG5 326 aaKnown RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 CTPS2Q9NRF8 586 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 GLRX2Q9NS18 164 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 CMTM6Q9NX76 183 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ZNF229Q9UJW7 825 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 PITPNC1Q9UKF7 332 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 RAB23Q9ULC3 237 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 GUCA1BQ9UMX6 200 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 GINS2Q9Y248 185 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 STARD10Q9Y365 291 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 CLUHO75153 1309 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 ABCB11O95342 1321 aa1.64□□□□□ -2.15
CBX3-208ENST00000497498 SONP18583 2426 aaKnown RBP1.64□□□□□ -2.15
CBX3-208ENST00000497498 COL5A1P20908 1838 aaPredicted RBP1.63□□□□□ -2.15
CBX3-208ENST00000497498 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.63□□□□□ -2.151e-9■■■■□ 26
CBX3-208ENST00000497498 RTTNQ86VV8 2226 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 MYO16Q9Y6X6 1858 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 TENM2Q9NT68 2774 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 FAM240BA0A1B0GVZ2 78 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 A0A1W2PPE3 182 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 FAM92AA1XBS5 289 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 LINC00862A6NCI5 91 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 CCDC182A6NF36 153 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 PDZK1P1A8MUH7 402 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 BTNL10A8MVZ5 291 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 KRBOX1C9JBD0 128 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 E5RI56 91 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 H0Y8G0 127 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 hCG_2039718K7EN88 272 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 K7ERQ8 282 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 PGRMC1O00264 195 aaKnown RBP1.63□□□□□ -2.15
CBX3-208ENST00000497498 CDC7O00311 574 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 CHP2O43745 196 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 DPM1O60762 260 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 ENTPD5O75356 428 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 RDH16O75452 317 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 EEDO75530 441 aaKnown RBP1.63□□□□□ -2.15
CBX3-208ENST00000497498 UPK3AO75631 287 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 CCNKO75909 580 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 OR2J3O76001 311 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 CIAO1O76071 339 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 GABARAPO95166 117 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 VAPBO95292 243 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 UTS2O95399 124 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 AHSA1O95433 338 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 TSPAN13O95857 204 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 IGLV2-23P01705 113 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 ASGR1P07306 291 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 RBP1P09455 135 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 ZNF250P15622 560 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 HOXB8P17481 243 aaPredicted RBP1.63□□□□□ -2.15
CBX3-208ENST00000497498 CSRP1P21291 193 aaKnown RBP1.63□□□□□ -2.15
CBX3-208ENST00000497498 WARSP23381 471 aaKnown RBP1.63□□□□□ -2.15
CBX3-208ENST00000497498 DCKP27707 260 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 BMI1P35226 326 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 UGT2B10P36537 528 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 SPAM1P38567 509 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 MAGEA6P43360 314 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 RPS5P46782 204 aaKnown RBP1.63□□□□□ -2.15
CBX3-208ENST00000497498 TFPI2P48307 235 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 PSMD8P48556 350 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 SRP9P49458 86 aaKnown RBP1.63□□□□□ -2.15
CBX3-208ENST00000497498 RGS6P49758 472 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 FBXW4P57775 412 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 SNAP25P60880 206 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 COPZ1P61923 177 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 MRPS22P82650 360 aaKnown RBP1.63□□□□□ -2.15
CBX3-208ENST00000497498 C2orf54Q08AI8 447 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 CDH17Q12864 832 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 BNIP2Q12982 314 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 DGCR6Q14129 220 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 ARHGAP19Q14CB8 494 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 PON3Q15166 354 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 SSX2Q16385 188 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 VPS26BQ4G0F5 336 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 COA6Q5JTJ3 125 aaKnown RBP1.63□□□□□ -2.15
CBX3-208ENST00000497498 DNLZQ5SXM8 178 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 MFSD14CQ5VZR4 134 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 DUPD1Q68J44 220 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 SLC8B1Q6J4K2 584 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 TTC33Q6PID6 262 aaPredicted RBP1.63□□□□□ -2.15
CBX3-208ENST00000497498 DUX4L9Q6RFH8 374 aaPredicted RBP1.63□□□□□ -2.15
CBX3-208ENST00000497498 UGT2A3Q6UWM9 527 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 PLEKHG7Q6ZR37 379 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 ZNF493Q6ZR52 646 aa1.63□□□□□ -2.15
CBX3-208ENST00000497498 COPS6Q7L5N1 327 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms