RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 KLHDC1Q8N7A1 406 aa13.89□□□□□ -0.19
SMC4-226ENST00000497311 C11orf44Q8N8P7 122 aa13.89□□□□□ -0.19
SMC4-226ENST00000497311 CCDC54Q8NEL0 328 aa13.89□□□□□ -0.19
SMC4-226ENST00000497311 NKX3-1Q99801 234 aaPredicted RBP13.89□□□□□ -0.19
SMC4-226ENST00000497311 MTCH1Q9NZJ7 389 aa13.89□□□□□ -0.19
SMC4-226ENST00000497311 TBL2Q9Y4P3 447 aaKnown RBP13.89□□□□□ -0.19
SMC4-226ENST00000497311 A0A0G2JK05 382 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 VGLL3A8MV65 326 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 CHST1O43916 411 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 ZNF737O75373 536 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 GATBO75879 557 aaKnown RBP13.88□□□□□ -0.19
SMC4-226ENST00000497311 SULT1C4O75897 302 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 SERPINA3P01011 423 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 ARG1P05089 322 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 ZNF728P0DKX0 622 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 ATP6V1E1P36543 226 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 C10orf67Q8IYJ2 551 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 OR10H4Q8NGA5 316 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 CFHR4Q92496 578 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 SLAMF9Q96A28 289 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 FOXRED1Q96CU9 486 aaPredicted RBP13.88□□□□□ -0.19
SMC4-226ENST00000497311 BORCS8Q96FH0 119 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 CIB1Q99828 191 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 ABCB10Q9NRK6 738 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.88□□□□□ -0.19
SMC4-226ENST00000497311 OAZ3Q9UMX2 235 aa13.88□□□□□ -0.19
SMC4-226ENST00000497311 IGKV1-27A0A075B6S5 117 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 F8VVB4 439 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 F8VWA3 439 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 H3BNX3 289 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 INMTO95050 263 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 APOL3O95236 402 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 RBP4P02753 201 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 VSIG10L2P0DP72 767 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 FAM189A2Q15884 450 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 PLA1AQ53H76 456 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 SLC25A26Q70HW3 274 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 EGFL6Q8IUX8 553 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 OR8H2Q8N162 312 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 DYNAPQ8N1N2 210 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 C10orf35Q96D05 121 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 MALSU1Q96EH3 234 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 SNX22Q96L94 193 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 OSBPL10Q9BXB5 764 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 CDCA4Q9BXL8 241 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 CHST5Q9GZS9 411 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 DSCAML1Q8TD84 2053 aa13.87□□□□□ -0.19
SMC4-226ENST00000497311 MEX3AA1L020 520 aaKnown RBP13.86□□□□□ -0.19
SMC4-226ENST00000497311 SAC3D1A6NKF1 404 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 ODF3BA8MYP8 253 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 OPN1MWP04001 364 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 OPN1MW2P0DN77 364 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 OPN1MW3P0DN78 364 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 IGHV1-8P0DP01 117 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 POLR2IP36954 125 aaKnown RBP13.86□□□□□ -0.19
SMC4-226ENST00000497311 RAB13P51153 203 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 MEF2CQ06413 473 aaPredicted RBP13.86□□□□□ -0.19
SMC4-226ENST00000497311 TMED1Q13445 227 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 CNN3Q15417 329 aaKnown RBP13.86□□□□□ -0.19
SMC4-226ENST00000497311 SSX2Q16385 188 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 ZNF626Q68DY1 528 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 HIST2H2BDQ6DRA6 164 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 FAM220AQ7Z4H9 259 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 OR11H6Q8NGC7 330 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 OR8J1Q8NGP2 316 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 RPS4Y2Q8TD47 263 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 EMG1Q92979 244 aaKnown RBP13.86□□□□□ -0.19
SMC4-226ENST00000497311 ZNF714Q96N38 554 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 PITPNC1Q9UKF7 332 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 TCF19Q9Y242 345 aa13.86□□□□□ -0.19
SMC4-226ENST00000497311 hADV38S2A0JD32 116 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 MEGF11A6BM72 1044 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 UBCP0CG48 685 aaKnown RBP13.85□□□□□ -0.19
SMC4-226ENST00000497311 PEX2P28328 305 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 ATP1B3P54709 279 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 DYNC1I2Q13409 638 aaKnown RBP13.85□□□□□ -0.19
SMC4-226ENST00000497311 EDDM3AQ14507 147 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 CCBE1Q6UXH8 406 aaPredicted RBP13.85□□□□□ -0.19
SMC4-226ENST00000497311 Q8IYB0 196 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 ENTHD1Q8IYW4 607 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 PRSS35Q8N3Z0 413 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 PP6455Q8WZ26 134 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 RFKQ969G6 155 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 EME1Q96AY2 570 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 GABARAPL3Q9BY60 117 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 RIBC2Q9H4K1 309 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 ZNF702PQ9H963 129 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 GNG8Q9UK08 70 aa13.85□□□□□ -0.19
SMC4-226ENST00000497311 LOC107986453A0A1B0GWG9 222 aa13.84□□□□□ -0.19
SMC4-226ENST00000497311 TMEM82A0PJX8 343 aa13.84□□□□□ -0.19
SMC4-226ENST00000497311 A6NDX4 124 aa13.84□□□□□ -0.19
SMC4-226ENST00000497311 HAND1O96004 215 aa13.84□□□□□ -0.19
SMC4-226ENST00000497311 CYB5AP00167 134 aa13.84□□□□□ -0.19
SMC4-226ENST00000497311 GABRR1P24046 479 aa13.84□□□□□ -0.19
SMC4-226ENST00000497311 RBP2P50120 134 aa13.84□□□□□ -0.19
SMC4-226ENST00000497311 OR12D2P58182 307 aa13.84□□□□□ -0.19
SMC4-226ENST00000497311 CDC42P60953 191 aa13.84□□□□□ -0.19
SMC4-226ENST00000497311 RDH10Q8IZV5 341 aa13.84□□□□□ -0.19
SMC4-226ENST00000497311 DNAAF1Q8NEP3 725 aa13.84□□□□□ -0.19
SMC4-226ENST00000497311 SEBOXQ9HB31 216 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms