RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 FAM189A1O60320 539 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 UGT2B11O75310 529 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 CA11O75493 328 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 UPK1BO75841 260 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 DHRS3O75911 302 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 APOEP02649 317 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 OR4E1P0C645 316 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 ZNF30P17039 623 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 RAB3BP20337 219 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 F8A1P23610 371 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 POLR2IP36954 125 aaKnown RBP3.29□□□□□ -1.88
SNX13-211ENST00000496855 HSPA13P48723 471 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 AP2S1P53680 142 aaPredicted RBP3.29□□□□□ -1.88
SNX13-211ENST00000496855 TAS2R46P59540 309 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 SLC7A9P82251 487 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 TAF1AQ15573 450 aaPredicted RBP3.29□□□□□ -1.88
SNX13-211ENST00000496855 FAM231DQ6ZW35 169 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 CEND1Q8N111 149 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 OR4S2Q8NH73 311 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 ENKURQ8TC29 256 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 NELFBQ8WX92 580 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 TM4SF18Q96CE8 201 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 SMARCD1Q96GM5 515 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 Q96MT0 163 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 MRPS26Q9BYN8 205 aaKnown RBP3.29□□□□□ -1.88
SNX13-211ENST00000496855 OR11A1Q9GZK7 315 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 RHOFQ9HBH0 211 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 MARCH5Q9NX47 278 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 TIMM22Q9Y584 194 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 RIMS2Q9UQ26 1411 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 ANKRD30AQ9BXX3 1397 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 PLEKHG1Q9ULL1 1385 aa3.29□□□□□ -1.88
SNX13-211ENST00000496855 TRAV8-6A0A0B4J262 113 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 A0A0J9YXY3 114 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 METTL15A6NJ78 407 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 BTNL10A8MVZ5 291 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 EFCAB9A8MZ26 197 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 C8orf87E5RJ46 101 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 H0YJX3 145 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 RAD1O60671 282 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 ENTPD6O75354 484 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 EPPINO95925 133 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 PTHP01270 115 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 MMP7P09237 267 aaPredicted RBP3.28□□□□□ -1.88
SNX13-211ENST00000496855 CCNE1P24864 410 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 PRSS3P35030 304 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 CTRLP40313 264 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 CDKN2BP42772 138 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 LGALS7P47929 136 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 TTPAP49638 278 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 IDH3GP51553 393 aaPredicted RBP3.28□□□□□ -1.88
SNX13-211ENST00000496855 RIPPLY3P57055 190 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 RAB14P61106 215 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 FAM3AP98173 230 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 FMODQ06828 376 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 PRDX1Q06830 199 aaKnown RBP3.28□□□□□ -1.88
SNX13-211ENST00000496855 ZNF235Q14590 738 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 LRRC10Q5BKY1 277 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 FAM92BQ6ZTR7 304 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 FAM183BPQ6ZVS7 135 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 NCCRP1Q6ZVX7 275 aaPredicted RBP3.28□□□□□ -1.88
SNX13-211ENST00000496855 MOB1BQ7L9L4 216 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 COX18Q8N8Q8 333 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 ACBD4Q8NC06 268 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 PPWD1Q96BP3 646 aaKnown RBP3.28□□□□□ -1.88
SNX13-211ENST00000496855 SPACA5Q96QH8 159 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 SDHCQ99643 169 aaPredicted RBP3.28□□□□□ -1.88
SNX13-211ENST00000496855 PRRT1Q99946 306 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 FBXL15Q9H469 300 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 POMKQ9H5K3 350 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 SLC25A22Q9H936 323 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 SPANXB1Q9NS25 103 aaPredicted RBP3.28□□□□□ -1.88
SNX13-211ENST00000496855 FAM206AQ9NX38 181 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 RAB22AQ9UL26 194 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 C2orf16Q68DN1 1984 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 SNAPC4Q5SXM2 1469 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 FLT4P35916 1363 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 IGHV1-69DA0A0B4J2H0 117 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 A0A1W2PRG6 482 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 WI2-2373I1.2A0A1W2PRP0 233 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 DAPL1A0PJW8 107 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 E5RI56 91 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 H3BQV1 296 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 KPNA3O00505 521 aaPredicted RBP3.28□□□□□ -1.88
SNX13-211ENST00000496855 PEX7O00628 323 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 UBDO15205 165 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 DENRO43583 198 aaKnown RBP3.28□□□□□ -1.88
SNX13-211ENST00000496855 SSNA1O43805 119 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 NDUFS5O43920 106 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 FADS1O60427 444 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 SERF1AO75920 110 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 SERPINA1P01009 418 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 TDGF1P13385 188 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 RPL12P30050 165 aaKnown RBP3.28□□□□□ -1.88
SNX13-211ENST00000496855 P2RX1P51575 399 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 TDGF1P3P51864 188 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 TCL1AP56279 114 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 DYNLL1P63167 89 aaKnown RBP3.28□□□□□ -1.88
SNX13-211ENST00000496855 SMAGPQ0VAQ4 97 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 SKP2Q13309 424 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms