RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 DECR2Q9NUI1 292 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 SDHAF2Q9NX18 166 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 SPRR3Q9UBC9 169 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 PFDN2Q9UHV9 154 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 PRSS50Q9UI38 385 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 TRBV6-7A0A0A0MS04 114 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 MFSD2BA6NFX1 497 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 CDRT15L2A8MXV6 281 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 CST4P01036 141 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 KNG1P01042 644 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 FTH1P19P0C7X4 201 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 OPRM1P35372 400 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 LUMP51884 338 aaPredicted RBP11.25□□□□□ -0.61
GARNL3-220ENST00000496711 BEX5Q5H9J7 111 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 DPPA2Q7Z7J5 298 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 PDZD9Q8IXQ8 264 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 LRRC20Q8TCA0 184 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 DHRS9Q9BPW9 319 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 SLX1AQ9BQ83 275 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 ZNF471Q9BX82 626 aaPredicted RBP11.25□□□□□ -0.61
GARNL3-220ENST00000496711 REG4Q9BYZ8 158 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 WDR13Q9H1Z4 485 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 SLC25A32Q9H2D1 315 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 C12orf49Q9H741 205 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 METTL8Q9H825 291 aaKnown RBP11.25□□□□□ -0.61
GARNL3-220ENST00000496711 ZDHHC11Q9H8X9 412 aa11.25□□□□□ -0.61
GARNL3-220ENST00000496711 MED12LQ86YW9 2145 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 FAM90A10PA6NDY2 464 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 FAM90A18PA6NE21 464 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 FAM90A16PA6NEW6 464 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 FAM90A20PA6NIJ5 464 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 FAM90A8PA6NJQ4 464 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 SLC22A20A6NK97 555 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 FAM90A7PA6NKC0 464 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 FAM90A22PA8MWA6 464 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 FAM90A12PA8MX19 464 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 FAM90A5PA8MXJ8 464 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 FAM90A23PA8MXZ1 464 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 IFNA2P01563 188 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 FAM90A15PP0C7V4 464 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 FAM90A13PP0C7W8 464 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 FAM90A14PP0C7W9 464 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 FAM90A24PP0C7X0 464 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 RBMXP38159 391 aaKnown RBP11.24□□□□□ -0.61
GARNL3-220ENST00000496711 PMELP40967 661 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 RNFT1Q5M7Z0 435 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 SLC22A25Q6T423 547 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 SAXO1Q8IYX7 474 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 DEFB124Q8NES8 71 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 OR1K1Q8NGR3 316 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 OR1S1Q8NH92 325 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 HPSE2Q8WWQ2 592 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 NANOS1Q8WY41 292 aaKnown RBP11.24□□□□□ -0.61
GARNL3-220ENST00000496711 PHYHIPLQ96FC7 376 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 ARPC5LQ9BPX5 153 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 ZNF552Q9H707 407 aaPredicted RBP11.24□□□□□ -0.61
GARNL3-220ENST00000496711 ZNF286AQ9HBT8 521 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 GP6Q9HCN6 339 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 C12orf4Q9NQ89 552 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 C1orf123Q9NWV4 160 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 SESN1Q9Y6P5 492 aa11.24□□□□□ -0.61
GARNL3-220ENST00000496711 ZNHIT1O43257 154 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 ZNF250P15622 560 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 FUT3P21217 361 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 APLNRP35414 380 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 NPBWR2P48146 333 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 CEACAM21Q3KPI0 293 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 FBXW9Q5XUX1 488 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 BRICD5Q6PL45 260 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 VASH2Q86V25 355 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 SGPP2Q8IWX5 399 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 Q8NFD4 153 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 C2orf50Q96LR7 162 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 ZNF75AQ96N20 296 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 FGF23Q9GZV9 251 aaPredicted RBP11.23□□□□□ -0.61
GARNL3-220ENST00000496711 ZNF442Q9H7R0 627 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 PARD6AQ9NPB6 346 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 CRIM1Q9NZV1 1036 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 STARD10Q9Y365 291 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 ZNF175Q9Y473 711 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 A0A1B0GW55 424 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 CRYM-AS1A6NIL9 109 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 MPTX1A8MV57 137 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 OR7C1O76099 320 aaPredicted RBP11.23□□□□□ -0.61
GARNL3-220ENST00000496711 CRYZL1O95825 349 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 IL18BPO95998 194 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 NGFP01138 241 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 DUX4L2P0CJ85 424 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 DUX4L3P0CJ86 424 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 DUX4L4P0CJ87 422 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 DUX4L5P0CJ88 424 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 DUX4L6P0CJ89 424 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 DUX4L7P0CJ90 424 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 PET100P0DJ07 73 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 LYL1P12980 280 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 BCL3P20749 454 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 HAAOP46952 286 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 TNFSF10P50591 281 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 GPM6AP51674 278 aa11.23□□□□□ -0.61
GARNL3-220ENST00000496711 CLN3Q13286 438 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms