RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 FIP1L1Q6UN15 594 aaKnown RBP18.25■□□□□ 0.51
C9orf3-222ENST00000496567 LRRC28Q86X40 367 aaPredicted RBP18.25■□□□□ 0.51
C9orf3-222ENST00000496567 FAM58AQ8N1B3 248 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 BATF2Q8N1L9 274 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 EMG1Q92979 244 aaKnown RBP18.25■□□□□ 0.51
C9orf3-222ENST00000496567 RBFOX1Q9NWB1 397 aaKnown RBP18.25■□□□□ 0.51
C9orf3-222ENST00000496567 NLKQ9UBE8 527 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 VWC2LB2RUY7 222 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 F8VVB4 439 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 F8VWA3 439 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 TMEM127O75204 238 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 BPNT1O95861 308 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 NR4A2P43354 598 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 HOXA4Q00056 320 aaPredicted RBP18.24■□□□□ 0.51
C9orf3-222ENST00000496567 DGUOKQ16854 277 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 SLC22A6Q4U2R8 563 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 C19orf18Q8NEA5 215 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 DEFB108BQ8NET1 73 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 Q8NFD4 153 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 SLC25A28Q96A46 364 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 DCSTAMPQ9H295 470 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 TMEM165Q9HC07 324 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 HMG20AQ9NP66 347 aa18.24■□□□□ 0.51
C9orf3-222ENST00000496567 IGHV4-30-2A0A087WSY4 118 aa18.23■□□□□ 0.51
C9orf3-222ENST00000496567 NDUFA2O43678 99 aa18.23■□□□□ 0.51
C9orf3-222ENST00000496567 HTR3BO95264 441 aa18.23■□□□□ 0.51
C9orf3-222ENST00000496567 ARSBP15848 533 aa18.23■□□□□ 0.51
C9orf3-222ENST00000496567 CAV3P56539 151 aa18.23■□□□□ 0.51
C9orf3-222ENST00000496567 ZNF404Q494X3 552 aa18.23■□□□□ 0.51
C9orf3-222ENST00000496567 TMEM155Q4W5P6 130 aa18.23■□□□□ 0.51
C9orf3-222ENST00000496567 KRTAP1-3Q8IUG1 177 aa18.23■□□□□ 0.51
C9orf3-222ENST00000496567 OR10K1Q8NGX5 313 aa18.23■□□□□ 0.51
C9orf3-222ENST00000496567 NDNFQ8TB73 568 aa18.23■□□□□ 0.51
C9orf3-222ENST00000496567 CST11Q9H112 138 aa18.23■□□□□ 0.51
C9orf3-222ENST00000496567 DAPK2Q9UIK4 370 aa18.23■□□□□ 0.51
C9orf3-222ENST00000496567 ITGB1BP2Q9UKP3 347 aa18.23■□□□□ 0.51
C9orf3-222ENST00000496567 NOTCH2Q04721 2471 aa18.22■□□□□ 0.51
C9orf3-222ENST00000496567 KNG1P01042 644 aa18.22■□□□□ 0.51
C9orf3-222ENST00000496567 PRKACAP17612 351 aa18.22■□□□□ 0.51
C9orf3-222ENST00000496567 SERPINA2P20848 420 aa18.22■□□□□ 0.51
C9orf3-222ENST00000496567 FGF12P61328 243 aa18.22■□□□□ 0.51
C9orf3-222ENST00000496567 P2RY14Q15391 338 aa18.22■□□□□ 0.51
C9orf3-222ENST00000496567 SPICQ8N5J4 248 aa18.22■□□□□ 0.51
C9orf3-222ENST00000496567 SLC25A46Q96AG3 418 aa18.22■□□□□ 0.51
C9orf3-222ENST00000496567 FAM3DQ96BQ1 224 aa18.22■□□□□ 0.51
C9orf3-222ENST00000496567 SEH1LQ96EE3 360 aa18.22■□□□□ 0.51
C9orf3-222ENST00000496567 MRPS24Q96EL2 167 aaKnown RBP18.22■□□□□ 0.51
C9orf3-222ENST00000496567 C1orf147Q96MC9 270 aaPredicted RBP18.22■□□□□ 0.51
C9orf3-222ENST00000496567 CSMD1Q96PZ7 3565 aa18.22■□□□□ 0.51
C9orf3-222ENST00000496567 IGHV3OR15-7A0A075B7D8 119 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 OR2AT4A6NND4 320 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 GTF2F2P13984 249 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 CLDN12P56749 244 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 SPCS2Q15005 226 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 SPIN3Q5JUX0 258 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 OSR2Q8N2R0 312 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 KCNG3Q8TAE7 436 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 Q96MF0 132 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 TMEM246Q9BRR3 403 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 LIN7BQ9HAP6 207 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 GLS2Q9UI32 602 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 SLC2A2P11168 524 aaPredicted RBP18.21■□□□□ 0.51
C9orf3-222ENST00000496567 DCDC5Q6ZRR9 648 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 OR51D1Q8NGF3 324 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 GAL3ST1Q99999 423 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 MRI1Q9BV20 369 aa18.21■□□□□ 0.51
C9orf3-222ENST00000496567 CRTAPO75718 401 aaPredicted RBP18.2■□□□□ 0.5
C9orf3-222ENST00000496567 GYPAP02724 150 aa18.2■□□□□ 0.5
C9orf3-222ENST00000496567 VSIG8P0DPA2 414 aa18.2■□□□□ 0.5
C9orf3-222ENST00000496567 PSG2P11465 335 aa18.2■□□□□ 0.5
C9orf3-222ENST00000496567 RORCP51449 518 aa18.2■□□□□ 0.5
C9orf3-222ENST00000496567 ZNF146Q15072 292 aa18.2■□□□□ 0.5
C9orf3-222ENST00000496567 C2orf76Q3KRA6 126 aa18.2■□□□□ 0.5
C9orf3-222ENST00000496567 IDNKQ5T6J7 187 aa18.2■□□□□ 0.5
C9orf3-222ENST00000496567 STUMQ69YW2 141 aa18.2■□□□□ 0.5
C9orf3-222ENST00000496567 OR2W3Q7Z3T1 314 aa18.2■□□□□ 0.5
C9orf3-222ENST00000496567 OR5T2Q8NGG2 359 aa18.2■□□□□ 0.5
C9orf3-222ENST00000496567 OR51T1Q8NGJ9 327 aa18.2■□□□□ 0.5
C9orf3-222ENST00000496567 ANGPTL6Q8NI99 470 aa18.2■□□□□ 0.5
C9orf3-222ENST00000496567 DNTTIP1Q9H147 329 aa18.2■□□□□ 0.5
C9orf3-222ENST00000496567 PCDHB10Q9UN67 800 aa18.2■□□□□ 0.5
C9orf3-222ENST00000496567 RFPL4AA6NLU0 287 aa18.19■□□□□ 0.5
C9orf3-222ENST00000496567 RFPL4AL1F8VTS6 287 aa18.19■□□□□ 0.5
C9orf3-222ENST00000496567 CALCBP10092 127 aa18.19■□□□□ 0.5
C9orf3-222ENST00000496567 NHLRC3Q5JS37 347 aa18.19■□□□□ 0.5
C9orf3-222ENST00000496567 ATPAF1Q5TC12 328 aaPredicted RBP18.19■□□□□ 0.5
C9orf3-222ENST00000496567 SEBOXQ9HB31 216 aaPredicted RBP18.19■□□□□ 0.5
C9orf3-222ENST00000496567 FBLN5Q9UBX5 448 aa18.19■□□□□ 0.5
C9orf3-222ENST00000496567 OR14J1Q9UGF5 321 aa18.19■□□□□ 0.5
C9orf3-222ENST00000496567 ST3GAL6Q9Y274 331 aa18.19■□□□□ 0.5
C9orf3-222ENST00000496567 CCDC168Q8NDH2 2452 aa18.19■□□□□ 0.5
C9orf3-222ENST00000496567 SETXQ7Z333 2677 aaKnown RBP18.19■□□□□ 0.5
C9orf3-222ENST00000496567 PRRC2AP48634 2157 aaKnown RBP18.18■□□□□ 0.5
C9orf3-222ENST00000496567 A0A1W2PP11 408 aa18.18■□□□□ 0.5
C9orf3-222ENST00000496567 NKX6-3A6NJ46 265 aa18.18■□□□□ 0.5
C9orf3-222ENST00000496567 TMEM14DPA8MWL7 114 aa18.18■□□□□ 0.5
C9orf3-222ENST00000496567 MGMTP16455 207 aa18.18■□□□□ 0.5
C9orf3-222ENST00000496567 CPT2P23786 658 aa18.18■□□□□ 0.5
C9orf3-222ENST00000496567 PRDX2P32119 198 aa18.18■□□□□ 0.5
C9orf3-222ENST00000496567 GABRA2P47869 451 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms