RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 C12orf29Q8N999 325 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 OR5H6Q8NGV6 325 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 OR5B3Q8NH48 314 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 ZNF502Q8TBZ5 544 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 RNF133Q8WVZ7 376 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 S100ZQ8WXG8 99 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 OR51V1Q9H2C8 321 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 ZDHHC11Q9H8X9 412 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 UGT1A7Q9HAW7 530 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 UGT1A8Q9HAW9 530 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 EML4Q9HC35 981 aaKnown RBP3.42□□□□□ -1.86
SF3B1-212ENST00000496458 SH2D2AQ9NP31 389 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 IFT46Q9NQC8 304 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 MMP26Q9NRE1 261 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 CYTL1Q9NRR1 136 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 RGS18Q9NS28 235 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 ZNF223Q9UK11 482 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-212ENST00000496458 GUCA1BQ9UMX6 200 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 PLLPQ9Y342 182 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 MYH7BA7E2Y1 1941 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 CENPFP49454 3210 aa3.42□□□□□ -1.86
SF3B1-212ENST00000496458 MYH1P12882 1939 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 BAZ2AQ9UIF9 1905 aaKnown RBP3.41□□□□□ -1.86
SF3B1-212ENST00000496458 TRBV6-6A0A0A6YYG2 114 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 A0A1B0GWB2 263 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 PSMB11A5LHX3 300 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 LYRM9A8MSI8 78 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 ZNF705EA8MWA4 302 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-212ENST00000496458 HACD1B0YJ81 288 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 CLDN25C9JDP6 229 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 LRRN3E7EW58 273 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 LOC110117498-PIK3R3F6TDL0 507 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 NPIPB7O75200 414 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 ALOX12BO75342 701 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 SPAG7O75391 227 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 TRAPPC6AO75865 159 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 CCNKO75909 580 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 ACSM4P0C7M7 580 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 CMA1P23946 247 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 SLCO1A2P46721 670 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 RAB13P51153 203 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 TAS2R60P59551 318 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 UNC119Q13432 240 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 GGTLC2Q14390 218 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 IMPG1Q17R60 797 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 YIF1BQ5BJH7 314 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 ACTL10Q5JWF8 245 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 C5orf46Q6UWT4 87 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 AHSA2Q719I0 299 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 COX15Q7KZN9 410 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 LHFPL3Q86UP9 236 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 HORMAD1Q86X24 394 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 ZNF786Q8N393 782 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 UBL4BQ8N7F7 174 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.41□□□□□ -1.86
SF3B1-212ENST00000496458 MDS2Q8NDY4 140 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 OR56B4Q8NH76 319 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 CXorf40AQ8TE69 158 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 TESCQ96BS2 214 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 PAGE5Q96GU1 130 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 CAPZA3Q96KX2 299 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 C12orf57Q99622 126 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 MRPL45Q9BRJ2 306 aaKnown RBP3.41□□□□□ -1.86
SF3B1-212ENST00000496458 SEC22CQ9BRL7 303 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 COPS4Q9BT78 406 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 RNF126Q9BV68 326 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 BEX2Q9BXY8 128 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 BCL2L14Q9BZR8 327 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 TOLLIPQ9H0E2 274 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 TMEM38AQ9H6F2 299 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 FOLH1BQ9HBA9 442 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 HMG20AQ9NP66 347 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 EXD2Q9NVH0 621 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 PLEKHJ1Q9NW61 149 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 COA4Q9NYJ1 87 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 GLTPQ9NZD2 209 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 FBXL3Q9UKT7 428 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 TBL2Q9Y4P3 447 aaKnown RBP3.41□□□□□ -1.86
SF3B1-212ENST00000496458 UGT2A1Q9Y4X1 527 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 DOCK3Q8IZD9 2030 aa3.41□□□□□ -1.86
SF3B1-212ENST00000496458 IGKV6-21A0A0C4DH24 114 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 A0A1B0GW55 424 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 TVP23AA6NH52 213 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 LEUTXA8MZ59 168 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 LINC00587B1AMM8 73 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 I3L4J1 428 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 PSMD12O00232 456 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 PGRMC1O00264 195 aaKnown RBP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 SULT1C2O00338 296 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 GYG2O15488 501 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 ERI3O43414 337 aaKnown RBP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 CCNE2O96020 404 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 CATP04040 527 aaKnown RBP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 IFNA6P05013 189 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 IFNA4P05014 189 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 IGHV4-34P06331 123 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 FABP1P07148 127 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 CD3GP09693 182 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 DUX4L2P0CJ85 424 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms