RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	MCRIP2	Q9BUT9	160 aa	Known RBP	6.22	□□□□□ -1.41
NVL-223	ENST00000496393	CLEC7A	Q9BXN2	247 aa		6.22	□□□□□ -1.41
NVL-223	ENST00000496393	TTTY10	Q9BZA0	68 aa		6.22	□□□□□ -1.41
NVL-223	ENST00000496393	LIN7B	Q9HAP6	207 aa		6.22	□□□□□ -1.41
NVL-223	ENST00000496393	GPR84	Q9NQS5	396 aa		6.22	□□□□□ -1.41
NVL-223	ENST00000496393	GPR173	Q9NS66	373 aa		6.22	□□□□□ -1.41
NVL-223	ENST00000496393	IL20	Q9NYY1	176 aa		6.22	□□□□□ -1.41
NVL-223	ENST00000496393	ABCD2	Q9UBJ2	740 aa		6.22	□□□□□ -1.41
NVL-223	ENST00000496393	LINC00527	Q9UJ94	153 aa		6.22	□□□□□ -1.41
NVL-223	ENST00000496393	SLC22A13	Q9Y226	551 aa		6.22	□□□□□ -1.41
NVL-223	ENST00000496393	PIGL	Q9Y2B2	252 aa		6.22	□□□□□ -1.41
NVL-223	ENST00000496393	LSM4	Q9Y4Z0	139 aa	Known RBP	6.22	□□□□□ -1.41
NVL-223	ENST00000496393	LYVE1	Q9Y5Y7	322 aa		6.22	□□□□□ -1.41
NVL-223	ENST00000496393	SESN1	Q9Y6P5	492 aa		6.22	□□□□□ -1.41
NVL-223	ENST00000496393	MINOS1-NBL1	R4GNA1	71 aa		6.22	□□□□□ -1.41
NVL-223	ENST00000496393	DSCAML1	Q8TD84	2053 aa		6.21	□□□□□ -1.41
NVL-223	ENST00000496393	STARD9	Q9P2P6	4700 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	LCE6A	A0A183	80 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	TMEM82	A0PJX8	343 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393		A6NIN4	97 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393		H3BUI4	141 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393		K7N7A8	449 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	TNFRSF11B	O00300	401 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	ZNF737	O75373	536 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	MMP23A	O75900	390 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	GAST	P01350	101 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	SNRNP70	P08621	437 aa	Known RBP	6.21	□□□□□ -1.42
NVL-223	ENST00000496393	HTR1D	P28221	377 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	ECI1	P42126	302 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	OR3A4P	P47883	348 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	BLVRA	P53004	296 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	HCCS	P53701	268 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	ESRRG	P62508	458 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	RIPPLY1	Q0D2K3	151 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	IL18R1	Q13478	541 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	SNAPC1	Q16533	368 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	DEFB136	Q30KP8	78 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	SAMD4B	Q5PRF9	694 aa	Known RBP	6.21	□□□□□ -1.42
NVL-223	ENST00000496393	ZNF684	Q5T5D7	378 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	PRAMEF5	Q5TYX0	476 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	ZFAND6	Q6FIF0	208 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	ASRGL1	Q7L266	308 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	SHF	Q7M4L6	423 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	C16orf82	Q7Z2V1	217 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	TRPM8	Q7Z2W7	1104 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	KRT77	Q7Z794	578 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	PIGW	Q7Z7B1	504 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	ANGPTL5	Q86XS5	388 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	CALHM1	Q8IU99	346 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	ZDHHC13	Q8IUH4	622 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	OR2T33	Q8NG76	320 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	OR4P4	Q8NGL7	312 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	OTOS	Q8NHW6	89 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	TRMT10A	Q8TBZ6	339 aa	Known RBP	6.21	□□□□□ -1.42
NVL-223	ENST00000496393	OR51E1	Q8TCB6	317 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	NOL4L	Q96MY1	436 aa	Predicted RBP	6.21	□□□□□ -1.42
NVL-223	ENST00000496393	NRIP2	Q9BQI9	281 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	CHST6	Q9GZX3	395 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	TMEM133	Q9H2Q1	129 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	CCDC134	Q9H6E4	229 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	EFCAB1	Q9HAE3	211 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	PALMD	Q9NP74	551 aa		6.21	□□□□□ -1.42
NVL-223	ENST00000496393	LYST	Q99698	3801 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393		F8VVB4	439 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393		F8VWA3	439 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	GSC2	O15499	205 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	OR2F2	O95006	317 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	CCNB2	O95067	398 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	NRAS	P01111	189 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	RBP4	P02753	201 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	MYCNOS	P40205	109 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	SNU13	P55769	128 aa	Known RBP	6.2	□□□□□ -1.42
NVL-223	ENST00000496393	MFGE8	Q08431	387 aa	Predicted RBP	6.2	□□□□□ -1.42
NVL-223	ENST00000496393	PLBD1	Q6P4A8	553 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	HACD2	Q6Y1H2	254 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	TRAPPC6B	Q86SZ2	158 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	ZNF573	Q86YE8	665 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	OR8H2	Q8N162	312 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393		Q8NFD4	153 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	RAX2	Q96IS3	184 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	NSMCE2	Q96MF7	247 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	RBM14	Q96PK6	669 aa	Known RBP	6.2	□□□□□ -1.42
NVL-223	ENST00000496393	RCHY1	Q96PM5	261 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	P2RX4	Q99571	388 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	TEAD3	Q99594	435 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	KRTAP17-1	Q9BYP8	105 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	PBOV1	Q9GZY1	135 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	HES4	Q9HCC6	221 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	SPAG4	Q9NPE6	437 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	CMC2	Q9NRP2	79 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	FAM206A	Q9NX38	181 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	VNN3	Q9NY84	501 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	IL36RN	Q9UBH0	155 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	ENPP5	Q9UJA9	477 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	GTF2A1L	Q9UNN4	478 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	BAIAP2	Q9UQB8	552 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	POLDIP2	Q9Y2S7	368 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393		U3KQV3	271 aa		6.2	□□□□□ -1.42
NVL-223	ENST00000496393	TMEM269	A0A1B0GVZ9	245 aa		6.19	□□□□□ -1.42
NVL-223	ENST00000496393	FAM230A	A0A1W2PPH8	454 aa		6.19	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms