RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 RELBQ01201 579 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 RAB40BQ12829 278 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 MRPL28Q13084 256 aaKnown RBP12.85□□□□□ -0.35
HDAC4-213ENST00000496347 ZSCAN26Q16670 478 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 ZBTB49Q6ZSB9 765 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 SLC25A26Q70HW3 274 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 RDH10Q8IZV5 341 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 ASCC1Q8N9N2 400 aaKnown RBP12.85□□□□□ -0.35
HDAC4-213ENST00000496347 HAVCR2Q8TDQ0 301 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 SLAMF9Q96A28 289 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 ADAT3Q96EY9 351 aaPredicted RBP12.85□□□□□ -0.35
HDAC4-213ENST00000496347 PELI1Q96FA3 418 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 C4orf36Q96KX1 117 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 ALG8Q9BVK2 526 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 MTCH1Q9NZJ7 389 aa12.85□□□□□ -0.35
HDAC4-213ENST00000496347 TRBV2A0A0J9YWF9 115 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 CLPSL1A2RUU4 121 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 ZNF737O75373 536 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 CYB5AP00167 134 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 RBP4P02753 201 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 AZGP1P25311 298 aaKnown RBP12.84□□□□□ -0.35
HDAC4-213ENST00000496347 NANOS3P60323 173 aaKnown RBP12.84□□□□□ -0.35
HDAC4-213ENST00000496347 PRB3Q04118 309 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-213ENST00000496347 GALEQ14376 348 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 TAF9Q16594 264 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 OLFML2AQ68BL7 652 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 DHRS7BQ6IAN0 325 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-213ENST00000496347 HCP5Q6MZN7 132 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 C17orf107Q6ZR85 190 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 LHFPL2Q6ZUX7 228 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 OR8H2Q8N162 312 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 BATF2Q8N1L9 274 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 BEND2Q8NDZ0 799 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 TAF15Q92804 592 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDAC4-213ENST00000496347 STMN2Q93045 179 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 OPALINQ96PE5 141 aa12.84□□□□□ -0.35
HDAC4-213ENST00000496347 SEBOXQ9HB31 216 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-213ENST00000496347 IGKV1-9A0A0C4DH69 117 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 LOC100130705A0A1B0GUX0 176 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 OR4C45A6NMZ5 311 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 MT-ND2P03891 347 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 CHRM2P08172 466 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 ATF1P18846 271 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 ATP1B3P54709 279 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 MTCP1P56278 107 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 ERVFRD-1P60508 538 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 COL10A1Q03692 680 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 AANATQ16613 207 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 SPIN3Q5JUX0 258 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 TMEM200BQ69YZ2 307 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 MKXQ8IYA7 352 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 PNKDQ8N490 385 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 OR13C3Q8NGS6 347 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 RHOXF1Q8NHV9 184 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 EMG1Q92979 244 aaKnown RBP12.83□□□□□ -0.36
HDAC4-213ENST00000496347 SLC29A1Q99808 456 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 HEXA-AS1Q9H8Q6 139 aa12.83□□□□□ -0.36
HDAC4-213ENST00000496347 SMPD3Q9NY59 655 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-213ENST00000496347 RPL36Q9Y3U8 105 aaKnown RBP12.83□□□□□ -0.36
HDAC4-213ENST00000496347 A0A1W2PRD5 423 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 A0A1W2PRF3 423 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 A0A1W2PRM7 423 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 TMEM212A6NML5 194 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 F8VVB4 439 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 F8VWA3 439 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 J3QLW9 94 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 HAND1O96004 215 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 CCDC159P0C7I6 412 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 OCM2P0CE71 109 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 OCMP0CE72 109 aaPredicted RBP12.82□□□□□ -0.36
HDAC4-213ENST00000496347 ZNF19P17023 458 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 POU3F4P49335 361 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 ALKBH1Q13686 389 aaKnown RBP12.82□□□□□ -0.36
HDAC4-213ENST00000496347 ZNF273Q14593 569 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 GDPD3Q7L5L3 318 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 ZNF676Q8N7Q3 588 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 OR4M1Q8NGD0 313 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 OR51A4Q8NGJ6 313 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 JAM3Q9BX67 310 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 NEK6Q9HC98 313 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 C8orf4Q9NR00 106 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 MRPS18AQ9NVS2 196 aaKnown RBP12.82□□□□□ -0.36
HDAC4-213ENST00000496347 FAM118AQ9NWS6 357 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 ERVK13-1Q9NX77 482 aa12.82□□□□□ -0.36
HDAC4-213ENST00000496347 PIPP12273 146 aaPredicted RBP12.81□□□□□ -0.36
HDAC4-213ENST00000496347 CCL3L1P16619 93 aa12.81□□□□□ -0.36
HDAC4-213ENST00000496347 TGFBR2P37173 567 aa12.81□□□□□ -0.36
HDAC4-213ENST00000496347 DLX6P56179 175 aa12.81□□□□□ -0.36
HDAC4-213ENST00000496347 ZNF146Q15072 292 aa12.81□□□□□ -0.36
HDAC4-213ENST00000496347 C11orf42Q8N5U0 333 aa12.81□□□□□ -0.36
HDAC4-213ENST00000496347 ZSCAN4Q8NAM6 433 aaPredicted RBP12.81□□□□□ -0.36
HDAC4-213ENST00000496347 APH1BQ8WW43 257 aa12.81□□□□□ -0.36
HDAC4-213ENST00000496347 FGGYQ96C11 551 aa12.81□□□□□ -0.36
HDAC4-213ENST00000496347 SNX22Q96L94 193 aa12.81□□□□□ -0.36
HDAC4-213ENST00000496347 COMMD4Q9H0A8 199 aa12.81□□□□□ -0.36
HDAC4-213ENST00000496347 RHOFQ9HBH0 211 aa12.81□□□□□ -0.36
HDAC4-213ENST00000496347 RBFOX1Q9NWB1 397 aaKnown RBP12.81□□□□□ -0.36
HDAC4-213ENST00000496347 AASSQ9UDR5 926 aa12.81□□□□□ -0.36
HDAC4-213ENST00000496347 MYRFQ9Y2G1 1151 aa12.81□□□□□ -0.36
HDAC4-213ENST00000496347 NOTCH1P46531 2555 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms