RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 TRBV5-5A0A0J9YX44 114 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 ZNF879B4DU55 563 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 C22orf46C9J442 243 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 SIGLEC5O15389 551 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 SYNGR1O43759 233 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 TOX4O94842 621 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 PSG2P11465 335 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 MAP2K4P45985 399 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 POU3F4P49335 361 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 MLLT11Q13015 90 aaPredicted RBP13.58□□□□□ -0.24
SF3A1-209ENST00000496189 TRAM1Q15629 374 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 GPR157Q5UAW9 335 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 SLC25A26Q70HW3 274 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 ANGPTL5Q86XS5 388 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 UPRTQ96BW1 309 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 DMRTB1Q96MA1 342 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 GAFA1Q96PS6 74 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 MGLLQ99685 303 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 NRIP2Q9BQI9 281 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 ACOT13Q9NPJ3 140 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 OR14J1Q9UGF5 321 aa13.58□□□□□ -0.24
SF3A1-209ENST00000496189 RPUSD1Q9UJJ7 312 aaKnown RBP13.58□□□□□ -0.24
SF3A1-209ENST00000496189 SVEP1Q4LDE5 3571 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 DOCK11Q5JSL3 2073 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 IGKV1-9A0A0C4DH69 117 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 A0A1W2PPH5 198 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 A0A1W2PQ09 198 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 PSMA1P25786 263 aaKnown RBP13.57□□□□□ -0.24
SF3A1-209ENST00000496189 CAV3P56539 151 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 BPIFB3P59826 476 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 TPBGQ13641 420 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 BLMHQ13867 455 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 KCTD21Q4G0X4 260 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 LIPKQ5VXJ0 399 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 USP43Q70EL4 1123 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 CALHM1Q8IU99 346 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 ZNF561Q8N587 486 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 FCGR1BQ92637 280 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 ZNF488Q96MN9 340 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 CNTD2Q9H8S5 307 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 TAS2R4Q9NYW5 299 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 ONECUT1Q9UBC0 465 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 GLS2Q9UI32 602 aa13.57□□□□□ -0.24
SF3A1-209ENST00000496189 ARHGAP32A7KAX9 2087 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 IGKV1D-17A0A075B6S4 117 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 TRAV40A0A0B4J280 105 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 RFPL4AA6NLU0 287 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 RFPL4AL1F8VTS6 287 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 INMTO95050 263 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 KNG1P01042 644 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 FSHBP01225 129 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 CPEP16870 476 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 PRDX2P32119 198 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 RPS11P62280 158 aaKnown RBP eCLIP13.56□□□□□ -0.24
SF3A1-209ENST00000496189 EMX1Q04741 257 aaPredicted RBP13.56□□□□□ -0.24
SF3A1-209ENST00000496189 PDCD1Q15116 288 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 ZNF773Q6PK81 442 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 SPARTQ8N0X7 666 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 OR13C5Q8NGS8 318 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 SLAMF9Q96A28 289 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 DACT3Q96B18 629 aaPredicted RBP13.56□□□□□ -0.24
SF3A1-209ENST00000496189 SDSLQ96GA7 329 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 WDFY2Q96P53 400 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 OR14A2Q96R54 314 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 GPER1Q99527 375 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 SLC6A7Q99884 636 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 DCTN5Q9BTE1 182 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 TMED9Q9BVK6 235 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 TMEM138Q9NPI0 162 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 KPTNQ9Y664 436 aa13.56□□□□□ -0.24
SF3A1-209ENST00000496189 IGKV1-27A0A075B6S5 117 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 A0A1B0GW55 424 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 TNFAIP8O95379 198 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 ALDOBP05062 364 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 DUX4L2P0CJ85 424 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 DUX4L3P0CJ86 424 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 DUX4L4P0CJ87 422 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 DUX4L5P0CJ88 424 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 DUX4L6P0CJ89 424 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 DUX4L7P0CJ90 424 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 BDKRB2P30411 391 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 TGFBR2P37173 567 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 ARF6P62330 175 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 KISS1Q15726 138 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 ACSM3Q53FZ2 586 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 ZNF529Q6P280 563 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 DUX4L9Q6RFH8 374 aaPredicted RBP13.55□□□□□ -0.24
SF3A1-209ENST00000496189 SATL1Q86VE3 508 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 BATF2Q8N1L9 274 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 ZNRF1Q8ND25 227 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 TBC1D15Q8TC07 691 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 C22orf15Q8WYQ4 148 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 EMG1Q92979 244 aaKnown RBP13.55□□□□□ -0.24
SF3A1-209ENST00000496189 DUX4Q9UBX2 424 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 FOXJ3Q9UPW0 622 aa13.55□□□□□ -0.24
SF3A1-209ENST00000496189 TRBV5-7A0A0A0MS05 114 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 TRBV23-1A0A0A0MS06 115 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 TRIM77I1YAP6 450 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 GPX5O75715 221 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 RGS9O75916 674 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms