RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 GTF2F2P13984 249 aa18.31■□□□□ 0.52
ECHDC3-205ENST00000496136 PTH2RP49190 550 aa18.31■□□□□ 0.52
ECHDC3-205ENST00000496136 ATP5J2P56134 94 aa18.31■□□□□ 0.52
ECHDC3-205ENST00000496136 SCAND1P57086 179 aa18.31■□□□□ 0.52
ECHDC3-205ENST00000496136 OR2W3Q7Z3T1 314 aa18.31■□□□□ 0.52
ECHDC3-205ENST00000496136 C1orf87Q8N0U7 546 aa18.31■□□□□ 0.52
ECHDC3-205ENST00000496136 GSX2Q9BZM3 304 aa18.31■□□□□ 0.52
ECHDC3-205ENST00000496136 NXF2Q9GZY0 626 aaKnown RBP18.31■□□□□ 0.52
ECHDC3-205ENST00000496136 HMG20AQ9NP66 347 aa18.31■□□□□ 0.52
ECHDC3-205ENST00000496136 RASL12Q9NYN1 266 aa18.31■□□□□ 0.52
ECHDC3-205ENST00000496136 NPTNQ9Y639 398 aa18.31■□□□□ 0.52
ECHDC3-205ENST00000496136 A0A075B6Q4 140 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 MGMTP16455 207 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 DNASE1P24855 282 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 EFNB2P52799 333 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 FGF12P61328 243 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 DYNC1I2Q13409 638 aaKnown RBP18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 SFRP4Q6FHJ7 346 aaPredicted RBP18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 ACP7Q6ZNF0 438 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 CDH24Q86UP0 819 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 OSR2Q8N2R0 312 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 C19orf18Q8NEA5 215 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 MCFD2Q8NI22 146 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 EMG1Q92979 244 aaKnown RBP18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 MRPS24Q96EL2 167 aaKnown RBP18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 CTDSP2O14595 271 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 SSX4O60224 188 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 MPIG6BO95866 241 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 PRKACAP17612 351 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 BMXP51813 675 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 OR51T1Q8NGJ9 327 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 PTX4Q96A99 478 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 PERPQ96FX8 193 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 LURAP1Q96LR2 239 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 CHODLQ9H9P2 273 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 IL36RNQ9UBH0 155 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 RAB22AQ9UL26 194 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 ETV7Q9Y603 341 aa18.3■□□□□ 0.52
ECHDC3-205ENST00000496136 MZT2AQ6P582 158 aa18.29■□□□□ 0.52
ECHDC3-205ENST00000496136 TMEM59Q9BXS4 323 aa18.29■□□□□ 0.52
ECHDC3-205ENST00000496136 SELENOIQ9C0D9 397 aa18.29■□□□□ 0.52
ECHDC3-205ENST00000496136 ST3GAL6Q9Y274 331 aa18.29■□□□□ 0.52
ECHDC3-205ENST00000496136 MAST4O15021 2626 aa18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 PPIAL4EA0A075B759 164 aa18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 PPIAL4DF5H284 164 aa18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 PPIAL4FP0DN26 164 aa18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 CD80P33681 288 aa18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 TMEM33P57088 247 aa18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 PIGYQ3MUY2 71 aa18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 METAP1DQ6UB28 335 aaPredicted RBP18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 ZNF525Q8N782 197 aa18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 SAMD12Q8N8I0 201 aa18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 C6orf62Q9GZU0 229 aaPredicted RBP18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 MMP27Q9H306 513 aa18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 BARX1Q9HBU1 254 aaPredicted RBP18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 BEX4Q9NWD9 120 aaPredicted RBP18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 PPIAL4AQ9Y536 164 aa18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 A3GALT2U3KPV4 340 aa18.28■□□□□ 0.52
ECHDC3-205ENST00000496136 RAB6AP20340 208 aa18.27■□□□□ 0.52
ECHDC3-205ENST00000496136 DUSP1P28562 367 aa18.27■□□□□ 0.52
ECHDC3-205ENST00000496136 SNU13P55769 128 aaKnown RBP18.27■□□□□ 0.52
ECHDC3-205ENST00000496136 RPS27AP62979 156 aaKnown RBP18.27■□□□□ 0.52
ECHDC3-205ENST00000496136 DEFB113Q30KQ7 82 aa18.27■□□□□ 0.52
ECHDC3-205ENST00000496136 SMIM21Q3B7S5 101 aa18.27■□□□□ 0.52
ECHDC3-205ENST00000496136 DEFB108BQ8NET1 73 aa18.27■□□□□ 0.52
ECHDC3-205ENST00000496136 OR5T2Q8NGG2 359 aa18.27■□□□□ 0.52
ECHDC3-205ENST00000496136 LPAR5Q9H1C0 372 aa18.27■□□□□ 0.52
ECHDC3-205ENST00000496136 NLKQ9UBE8 527 aa18.27■□□□□ 0.52
ECHDC3-205ENST00000496136 DNAJB11Q9UBS4 358 aa18.27■□□□□ 0.52
ECHDC3-205ENST00000496136 IGHV3OR15-7A0A075B7D8 119 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 CLDN25C9JDP6 229 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 HPGDSO60760 199 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 ART1P52961 327 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 RBM11P57052 281 aaKnown RBP18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 ZNF146Q15072 292 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 CARTPTQ16568 116 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 MICBQ29980 383 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 NHLRC3Q5JS37 347 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 TEX36Q5VZQ5 186 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 BIVMQ86UB2 503 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 FAM90A1Q86YD7 464 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 NINJ1Q92982 152 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 MBD6Q96DN6 1003 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 SLC25A38Q96DW6 304 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 Q96M66 194 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 GAL3ST1Q99999 423 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 MYOZ1Q9NP98 299 aaPredicted RBP18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 RHBDL2Q9NX52 303 aa18.27■□□□□ 0.51
ECHDC3-205ENST00000496136 OOEPA6NGQ2 149 aa18.26■□□□□ 0.51
ECHDC3-205ENST00000496136 LGALS8O00214 317 aa18.26■□□□□ 0.51
ECHDC3-205ENST00000496136 RGS5O15539 181 aa18.26■□□□□ 0.51
ECHDC3-205ENST00000496136 MUC1P15941 1255 aaPredicted RBP18.26■□□□□ 0.51
ECHDC3-205ENST00000496136 TAF9Q16594 264 aa18.26■□□□□ 0.51
ECHDC3-205ENST00000496136 PEG10Q86TG7 708 aaKnown RBP18.26■□□□□ 0.51
ECHDC3-205ENST00000496136 NICN1Q9BSH3 213 aa18.26■□□□□ 0.51
ECHDC3-205ENST00000496136 TM2D1Q9BX74 207 aa18.26■□□□□ 0.51
ECHDC3-205ENST00000496136 TMEM165Q9HC07 324 aa18.26■□□□□ 0.51
ECHDC3-205ENST00000496136 PTTG2Q9NZH5 202 aa18.26■□□□□ 0.51
ECHDC3-205ENST00000496136 RFPL4AA6NLU0 287 aa18.25■□□□□ 0.51
ECHDC3-205ENST00000496136 OR2AT4A6NND4 320 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms