RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	TOX3	O15405	576 aa	Predicted RBP	11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	CA11	O75493	328 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	DUSP1	P28562	367 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	CLINT1	Q14677	625 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	SPIN3	Q5JUX0	258 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	CRIP3	Q6Q6R5	217 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	FADS6	Q8N9I5	356 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	SUMF1	Q8NBK3	374 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	RNF138	Q8WVD3	245 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	LIME1	Q9H400	295 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	C19orf12	Q9NSK7	152 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	GPR137B	O60478	399 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	CCL3	P10147	92 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	OMG	P23515	440 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	NHLH2	Q02577	135 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	HABP2	Q14520	560 aa	Predicted RBP	11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	C10orf128	Q5T292	105 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	ADAM5	Q6NVV9	412 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	SLC16A13	Q7RTY0	426 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	OR11L1	Q8NGX0	322 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	MR1	Q95460	341 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	HIST1H2BA	Q96A08	127 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	IP6K3	Q96PC2	410 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	PBDC1	Q9BVG4	233 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	SH3BGRL3	Q9H299	93 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	ST3GAL6	Q9Y274	331 aa		11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	PTRH2	Q9Y3E5	179 aa	Known RBP	11.7	□□□□□ -0.54
SUPT20H-222	ENST00000495071	LOC102725191	A0A1B0GVB3	256 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071		A0A1W2PPH5	198 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071		A0A1W2PQM1	296 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	OR7C1	O76099	320 aa	Predicted RBP	11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	EIF3I	Q13347	325 aa	Known RBP	11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	PIGC	Q92535	297 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	NABP1	Q96AH0	204 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	CRLF2	Q9HC73	371 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	SLC7A11	Q9UPY5	501 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	IGHV5-10-1	A0A0J9YXX1	117 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	SLC33A1	O00400	549 aa	Predicted RBP	11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	NRAS	P01111	189 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	B4GALT1	P15291	398 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	SNCA	P37840	140 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	MALL	Q13021	153 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	TMEM187	Q14656	261 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	OR52M1	Q8NGK5	317 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	C10orf35	Q96D05	121 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	SUCNR1	Q9BXA5	334 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	BCO1	Q9HAY6	547 aa		11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071	RCL1	Q9Y2P8	373 aa	Known RBP	11.69	□□□□□ -0.54
SUPT20H-222	ENST00000495071		A0A087WZY1	265 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	NSG1	A0A0A6YYJ2	146 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	GDF9	O60383	454 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	MT-ND4L	P03901	98 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	ARG1	P05089	322 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	SEC11B	P0C7V7	166 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	OR2B8P	P59922	312 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	PLCXD3	Q63HM9	321 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	LIAT1	Q6ZQX7	453 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	OSR2	Q8N2R0	312 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	CCDC71L	Q8N9Z2	235 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	TMEM54	Q969K7	222 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	SLAMF9	Q96A28	289 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	PHF7	Q9BWX1	381 aa	Predicted RBP	11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	ZNF700	Q9H0M5	742 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	ADAMTS9	Q9P2N4	1935 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	hCG_1809904	A0A1W2PP81	198 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071		A0A1W2PR64	198 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071		A0A1W2PRV1	198 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	IGLV3-1	P01715	115 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	P2RY1	P47900	373 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	ZNF561	Q8N587	486 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	FAM24B	Q8N5W8	94 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	MARS2	Q96GW9	593 aa	Known RBP	11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	OCIAD1	Q9NX40	245 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	UBE2J1	Q9Y385	318 aa	Predicted RBP	11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	TIMM10B	Q9Y5J6	103 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	KLK3	P07288	261 aa	Predicted RBP	11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	DANCR	P0C864	163 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	DTYMK	P23919	212 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	B2M	P61769	119 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	GPR137C	Q8N3F9	429 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	OR10AD1	Q8NGE0	317 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	OR1F12	Q8NHA8	337 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	CFAP54	Q96N23	3096 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	WFDC1	Q9HC57	220 aa		11.68	□□□□□ -0.54
SUPT20H-222	ENST00000495071	CCDC163	A0A0D9SF12	145 aa		11.67	□□□□□ -0.54
SUPT20H-222	ENST00000495071	DSCR4	P56555	118 aa	Predicted RBP	11.67	□□□□□ -0.54
SUPT20H-222	ENST00000495071	H3F3A	P84243	136 aa		11.67	□□□□□ -0.54
SUPT20H-222	ENST00000495071	RAB35	Q15286	201 aa		11.67	□□□□□ -0.54
SUPT20H-222	ENST00000495071	GPR157	Q5UAW9	335 aa		11.67	□□□□□ -0.54
SUPT20H-222	ENST00000495071	CDCP2	Q5VXM1	449 aa		11.67	□□□□□ -0.54
SUPT20H-222	ENST00000495071	COMMD1	Q8N668	190 aa		11.67	□□□□□ -0.54
SUPT20H-222	ENST00000495071	ZNF565	Q8N9K5	539 aa		11.67	□□□□□ -0.54
SUPT20H-222	ENST00000495071	CCDC54	Q8NEL0	328 aa		11.67	□□□□□ -0.54
SUPT20H-222	ENST00000495071		A0A0J9YW62	118 aa		11.67	□□□□□ -0.54
SUPT20H-222	ENST00000495071	ACAA1	P09110	424 aa	Predicted RBP	11.67	□□□□□ -0.54

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