RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SBNO1A3KN83 1393 aa1.29□□□□□ -2.2
ITGB1-216ENST00000493758 ARHGEF11O15085 1522 aa1.29□□□□□ -2.2
ITGB1-216ENST00000493758 CC2D2AQ9P2K1 1620 aa1.29□□□□□ -2.2
ITGB1-216ENST00000493758 TRIM64CA6NLI5 447 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 GOLGA8TH3BQL2 631 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 K7ERS5 55 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 CASQ2O14958 399 aaPredicted RBP1.28□□□□□ -2.2
ITGB1-216ENST00000493758 HLA-AP01891 365 aaKnown RBP1.28□□□□□ -2.2
ITGB1-216ENST00000493758 OPN1SWP03999 348 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 GALP22466 123 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 ZNF404Q494X3 552 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 TTC32Q5I0X7 151 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 TMEM215Q68D42 235 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 ULK3Q6PHR2 472 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 CA5BP1Q8WTZ4 195 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 OR8D1Q8WZ84 308 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 CLSTN2Q9H4D0 955 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 ASB7Q9H672 318 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 PXMP2Q9NR77 195 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 RBM22Q9NW64 420 aaKnown RBP eCLIP1.28□□□□□ -2.23e-6■■■■■ 30.7
ITGB1-216ENST00000493758 SLC7A11Q9UPY5 501 aa1.28□□□□□ -2.2
ITGB1-216ENST00000493758 COL6A3P12111 3177 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 TRANK1O15050 2925 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 MYO9BQ13459 2157 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 VWA8A3KMH1 1905 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 A8MWP4 228 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 F5H5P2 479 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 ISLRO14498 428 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 HMMRO75330 724 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 S1PR2O95136 353 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 IGKV1D-33P01593 117 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 IGKV1-33P01594 117 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 MLF1P58340 268 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 PAFAH1B2P68402 229 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 ST3GAL4Q11206 333 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 VTCN1Q7Z7D3 282 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 NT5CQ8TCD5 201 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 GPX8Q8TED1 209 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 ING5Q8WYH8 240 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.27□□□□□ -2.21
ITGB1-216ENST00000493758 FXYD5Q96DB9 178 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 TMED9Q9BVK6 235 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 NAA50Q9GZZ1 169 aaKnown RBP1.27□□□□□ -2.21
ITGB1-216ENST00000493758 KIR3DX1Q9H7L2 352 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 ADA2Q9NZK5 511 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 ORC6Q9Y5N6 252 aa1.27□□□□□ -2.21
ITGB1-216ENST00000493758 GOLGB1Q14789 3259 aaKnown RBP1.27□□□□□ -2.21
ITGB1-216ENST00000493758 ARAP1Q96P48 1450 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 H3BMM0 161 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 DNAJB6O75190 326 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 FGF4P08620 206 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 OR5AL1P0C617 328 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 GZMAP12544 262 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 GABRR2P28476 465 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 ATP6AP1LQ52LC2 224 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 CLEC12AQ5QGZ9 265 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 TTC19Q6DKK2 380 aaPredicted RBP1.26□□□□□ -2.21
ITGB1-216ENST00000493758 OR2W3Q7Z3T1 314 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 SETD3Q86TU7 594 aaPredicted RBP1.26□□□□□ -2.21
ITGB1-216ENST00000493758 CNPY4Q8N129 248 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 OR8K1Q8NGG5 319 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 UBE2WQ96B02 151 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 TSNAXQ99598 290 aaKnown RBP1.26□□□□□ -2.21
ITGB1-216ENST00000493758 GABRG3Q99928 467 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 DDX19BQ9UMR2 479 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 INSIG2Q9Y5U4 225 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 KMT2EQ8IZD2 1858 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 ZFHX4Q86UP3 3567 aa1.26□□□□□ -2.21
ITGB1-216ENST00000493758 BAZ1AQ9NRL2 1556 aaPredicted RBP1.25□□□□□ -2.21
ITGB1-216ENST00000493758 SZT2Q5T011 3432 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 BRCA1P38398 1863 aaKnown RBP1.25□□□□□ -2.21
ITGB1-216ENST00000493758 A0A0B4J2C4 111 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 TRGV4A0A0C4DH28 118 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 SERTM2A0A1B0GWG4 89 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 RGS5O15539 181 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 TPM2P07951 284 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 ARL14EPLP0DKL9 152 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 CGB3P0DN86 165 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 CGB7P0DN87 165 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 MLNP12872 115 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 ANXA8P13928 327 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 RAB11BQ15907 218 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 ANXA8L1Q5VT79 327 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 THOC7Q6I9Y2 204 aaKnown RBP1.25□□□□□ -2.21
ITGB1-216ENST00000493758 ZNF322Q6U7Q0 402 aaPredicted RBP1.25□□□□□ -2.21
ITGB1-216ENST00000493758 ANGPTL8Q6UXH0 198 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 SLC35D2Q76EJ3 337 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 PROKR2Q8NFJ6 384 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 OR10D4PQ8NGN7 298 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 RILPQ96NA2 401 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 SRRQ9GZT4 340 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 ARMC7Q9H6L4 198 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 C6orf50Q9HD87 102 aa1.25□□□□□ -2.21
ITGB1-216ENST00000493758 EYSQ5T1H1 3165 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 A0A1W2PRF3 423 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 A0A1W2PRM7 423 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 FFAR1O14842 300 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 PLEKHA8P1O95397 391 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 IMPA1P29218 277 aa1.24□□□□□ -2.21
ITGB1-216ENST00000493758 SSX1Q16384 188 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms