RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 Q6ZS49 121 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 DTX1Q86Y01 620 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 MCEMP1Q8IX19 187 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 SLC38A6Q8IZM9 456 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 FBXL14Q8N1E6 418 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 TMEM105Q8N8V8 129 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 LRTM2Q8N967 370 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 OR10AD1Q8NGE0 317 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 MAFIPQ8WZ33 124 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 ZNF845Q96IR2 970 aaPredicted RBP8.36□□□□□ -1.07
NPHP3-209ENST00000493732 OR10C1Q96KK4 312 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 CNTNAP3BQ96NU0 1288 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 CNTNAP3Q9BZ76 1288 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 PLK3Q9H4B4 646 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 ZC4H2Q9NQZ6 224 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 GSKIPQ9P0R6 139 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 TUBD1Q9UJT1 453 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 FBXO9Q9UK97 447 aaPredicted RBP8.36□□□□□ -1.07
NPHP3-209ENST00000493732 MED12Q93074 2177 aa8.36□□□□□ -1.07
NPHP3-209ENST00000493732 LNP1A1A4G5 178 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 H0YIZ8 118 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 GEMIN2O14893 280 aaKnown RBP8.35□□□□□ -1.07
NPHP3-209ENST00000493732 SCO1O75880 301 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 JTBO76095 146 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 MT-CO3P00414 261 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 GAPDHP04406 335 aaKnown RBP8.35□□□□□ -1.07
NPHP3-209ENST00000493732 SFTPBP07988 381 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 HOXB5P09067 269 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 PATE4P0C8F1 98 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 ITGA3P26006 1051 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 PLGLB1Q02325 96 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 RAB32Q13637 225 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 RBM39Q14498 530 aaKnown RBP8.35□□□□□ -1.07
NPHP3-209ENST00000493732 FAM74A1Q5RGS3 127 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 TFAP2EQ6VUC0 442 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 IL34Q6ZMJ4 242 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 MKXQ8IYA7 352 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 SPERTQ8NA61 448 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 APH1AQ96BI3 265 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 HIST1H2AAQ96QV6 131 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 DMRTA2Q96SC8 542 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 SULT4A1Q9BR01 284 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 REPIN1Q9BWE0 567 aaKnown RBP8.35□□□□□ -1.07
NPHP3-209ENST00000493732 TTTY12Q9BZ98 90 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 SMOC1Q9H4F8 434 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 NAA60Q9H7X0 242 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 GP6Q9HCN6 339 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 CYTL1Q9NRR1 136 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 SLC7A10Q9NS82 523 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 COL27A1Q8IZC6 1860 aaPredicted RBP8.35□□□□□ -1.07
NPHP3-209ENST00000493732 K7EPK0 472 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 PLATP00750 562 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 CTXN2P0C2S0 81 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 CD79AP11912 226 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 PIGPP57054 158 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 S100A10P60903 97 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 HERV-K104P61576 105 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 MPV17LQ2QL34 196 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 CEACAM21Q3KPI0 293 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 PLA2G2CQ5R387 149 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 TCEAL6Q6IPX3 200 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 MRPL21Q7Z2W9 205 aaKnown RBP8.35□□□□□ -1.07
NPHP3-209ENST00000493732 LINC00596Q86U02 117 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 LGI3Q8N145 548 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 FAM71E2Q8N5Q1 922 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 ZNF611Q8N823 705 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 CPEB3Q8NE35 698 aaKnown RBP8.35□□□□□ -1.07
NPHP3-209ENST00000493732 LHFPL5Q8TAF8 219 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 ADAMTS17Q8TE56 1095 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 RTN4IP1Q8WWV3 396 aaPredicted RBP8.35□□□□□ -1.07
NPHP3-209ENST00000493732 TCEAL3Q969E4 200 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 RRNAD1Q96FB5 475 aaKnown RBP8.35□□□□□ -1.07
NPHP3-209ENST00000493732 C1QTNF6Q9BXI9 259 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 SLC5A7Q9GZV3 580 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 RIMS4Q9H426 269 aaPredicted RBP8.35□□□□□ -1.07
NPHP3-209ENST00000493732 ZNF442Q9H7R0 627 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 SPACA1Q9HBV2 294 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 OR5AC2Q9NZP5 309 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 PCDHB10Q9UN67 800 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 STARD10Q9Y365 291 aa8.35□□□□□ -1.07
NPHP3-209ENST00000493732 SDK2Q58EX2 2172 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 IGKV1D-8A0A087WSZ0 117 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 IGKV1-12A0A0C4DH73 117 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 PQLC2LA1A4F0 135 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 E5RGE8 158 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 M0R296 226 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 LGALS8O00214 317 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 DIRAS3O95661 229 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 IGKV1D-12P01611 117 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 APOC3P02656 99 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 CD59P13987 128 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 EDN3P14138 238 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 CD46P15529 392 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 BLOC1S1P78537 153 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 SRYQ05066 204 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 GPR157Q5UAW9 335 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 SLC22A25Q6T423 547 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 GLRX5Q86SX6 157 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 TUSC5Q8IXB3 177 aa8.34□□□□□ -1.07
NPHP3-209ENST00000493732 ZDHHC23Q8IYP9 409 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms