RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 OMGP23515 440 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 EEF1B2P24534 225 aaKnown RBP2.31□□□□□ -2.04
PTCD3-218ENST00000493430 LCN1P31025 176 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 CD80P33681 288 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 SNU13P55769 128 aaKnown RBP2.31□□□□□ -2.04
PTCD3-218ENST00000493430 PRPS1P60891 318 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 GMFBP60983 142 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 NAA20P61599 178 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 COPZ1P61923 177 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 SNRPD2P62316 118 aaKnown RBP2.31□□□□□ -2.04
PTCD3-218ENST00000493430 CCL8P80075 99 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 LCN2P80188 198 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 PUDPQ08623 228 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 ACSM1Q08AH1 577 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 FADDQ13158 208 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 RAB35Q15286 201 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 GSG1Q2KHT4 349 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 VWC2Q2TAL6 325 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 IQCCQ4KMZ1 466 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 FGD3Q5JSP0 725 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 THEM4Q5T1C6 240 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 AGAP6Q5VW22 663 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 PRAMEF6Q5VXH4 476 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 PODNL1Q6PEZ8 512 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 CLEC2AQ6UVW9 174 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 REG3GQ6UW15 175 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 C6orf89Q6UWU4 347 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 LYPD2Q6UXB3 125 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 CCBE1Q6UXH8 406 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-218ENST00000493430 Q6ZR03 302 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF826PQ6ZT77 177 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 TMEM179BQ7Z7N9 219 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 PDZD9Q8IXQ8 264 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 HS3ST5Q8IZT8 346 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 PNKDQ8N490 385 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 CD177Q8N6Q3 437 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 TRIML2Q8N7C3 387 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 NHLRC2Q8NBF2 726 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 CYB561A3Q8NBI2 242 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 CSNK1G2-AS1Q8NCQ2 148 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 SDR9C7Q8NEX9 313 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 OR9Q1Q8NGQ5 310 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 OR4Q3Q8NH05 313 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 OR5J2Q8NH18 312 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 OR2AE1Q8NHA4 323 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 MFSD8Q8NHS3 518 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.31□□□□□ -2.04
PTCD3-218ENST00000493430 SGTBQ96EQ0 304 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF317Q96PQ6 595 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-218ENST00000493430 AMELYQ99218 206 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 SEPHS2Q99611 448 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 DOK1Q99704 481 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 SLC6A7Q99884 636 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF426Q9BUY5 554 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 KATNB1Q9BVA0 655 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF416Q9BWM5 594 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 HCAR1Q9BXC0 346 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 PLA2G12AQ9BZM1 189 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 OR2J1Q9GZK6 312 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 SLC5A7Q9GZV3 580 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 C1orf21Q9H246 121 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 TMEM38AQ9H6F2 299 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 EGLN3Q9H6Z9 239 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 METTL17Q9H7H0 456 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-218ENST00000493430 RNF121Q9H920 327 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 ESM1Q9NQ30 184 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 TIGARQ9NQ88 270 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 MMP26Q9NRE1 261 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 POLE3Q9NRF9 147 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 GLRX2Q9NS18 164 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 PAQR5Q9NXK6 330 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-218ENST00000493430 MRPL39Q9NYK5 338 aaKnown RBP2.31□□□□□ -2.04
PTCD3-218ENST00000493430 UBAP1Q9NZ09 502 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 PTTG3PQ9NZH4 202 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF581Q9P0T4 197 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 TAAR3PQ9P1P4 343 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 IL19Q9UHD0 177 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 RIMS3Q9UJD0 308 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 PRDM4Q9UKN5 801 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 ELF5Q9UKW6 265 aaPredicted RBP2.31□□□□□ -2.04
PTCD3-218ENST00000493430 BLOC1S6Q9UL45 172 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 TRAPPC4Q9Y296 219 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 POFUT2Q9Y2G5 429 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 KLHDC2Q9Y2U9 406 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 PPIAL4AQ9Y536 164 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 N6AMT1Q9Y5N5 214 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 FBN3Q75N90 2809 aa2.31□□□□□ -2.04
PTCD3-218ENST00000493430 ARPC4-TTLL3A0A0A6YYG9 625 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 IGHV3-38A0A0C4DH36 116 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 A0A1W2PRD5 423 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 A0A1W2PRF3 423 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 A0A1W2PRM7 423 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 ISPDA4D126 451 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 C5orf49A4QMS7 147 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 PRORSD1PA6NEY8 169 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 FAM183AA6NL82 134 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF726A6NNF4 738 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 EFCAB9A8MZ26 197 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 EVPLLA8MZ36 301 aa2.3□□□□□ -2.04
PTCD3-218ENST00000493430 F5H5P2 479 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms