RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ALDOBP05062 364 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 LIPFP07098 398 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 CHRM2P08172 466 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 ACAA1P09110 424 aaPredicted RBP6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 CPEP16870 476 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 FSTP19883 344 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 MYL9P24844 172 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 GABRA5P31644 462 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 SNU13P55769 128 aaKnown RBP6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 EMX1Q04741 257 aaPredicted RBP6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 HNRNPA0Q13151 305 aaKnown RBP6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 TPBGQ13641 420 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 BLMHQ13867 455 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 GPR176Q14439 515 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 CR1LQ2VPA4 569 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 C11orf91Q3C1V1 193 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 KCTD21Q4G0X4 260 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 WDR25Q64LD2 544 aaPredicted RBP6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 ZNF773Q6PK81 442 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 LYPD2Q6UXB3 125 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 SAXO1Q8IYX7 474 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 CMTM4Q8IZR5 234 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 FAM58AQ8N1B3 248 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 ZNF561Q8N587 486 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 ZNF485Q8NCK3 441 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 RGP1Q92546 391 aaPredicted RBP6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 PHYHIPQ92561 330 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 TMEM203Q969S6 136 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 FOXRED1Q96CU9 486 aaPredicted RBP6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 C1orf159Q96HA4 380 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 ZNF488Q96MN9 340 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 DERL3Q96Q80 235 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 NUDT16L1Q9BRJ7 211 aaKnown RBP6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 FGF23Q9GZV9 251 aaPredicted RBP6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 WDR13Q9H1Z4 485 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 C7orf69Q9H7B7 122 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 NOX4Q9NPH5 578 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 ACOT13Q9NPJ3 140 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 TMEM160Q9NX00 188 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 KAAG1Q9UBP8 84 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 SLC25A10Q9UBX3 287 aaPredicted RBP6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 LSM2Q9Y333 95 aaKnown RBP6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 ABCA2Q9BZC7 2435 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 MTORP42345 2549 aa6.79□□□□□ -1.32
TM4SF1-204ENST00000493348 SONP18583 2426 aaKnown RBP6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 IGKV1-27A0A075B6S5 117 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 PPIAL4CA0A0B4J2A2 164 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 hCG_1809904A0A1W2PP81 198 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 A0A1W2PPE2 198 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 A0A1W2PR64 198 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 A0A1W2PRV1 198 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 FUOMA2VDF0 154 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 A8MXK9 166 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 PDCD5O14737 125 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 SIGLEC5O15389 551 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 ANGPTL7O43827 346 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 KDM4BO94953 1096 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 HTR3BO95264 441 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 IFNA2P01563 188 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 PSG2P11465 335 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 ZNF44P15621 663 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 SRD5A1P18405 259 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 BCL3P20749 454 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 GABRR1P24046 479 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 PRDX2P32119 198 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 RBMXP38159 391 aaKnown RBP6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 MTNR1BP49286 362 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 PSMD7P51665 324 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 SEC61A1P61619 476 aaKnown RBP6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 SCN1BQ07699 218 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 NEDD8Q15843 81 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 SPIN3Q5JUX0 258 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 FAM120AOSQ5T036 256 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 ATPAF1Q5TC12 328 aaPredicted RBP6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 METTL11BQ5VVY1 283 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 STUMQ69YW2 141 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 AWAT2Q6E213 333 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 BTN2A1Q7KYR7 527 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 GDPD3Q7L5L3 318 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 SPARTQ8N0X7 666 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 FAM216BQ8N7L0 139 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 TSPAN14Q8NG11 270 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 OR52N4Q8NGI2 321 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 OR5D13Q8NGL4 314 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 ANGPTL6Q8NI99 470 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 TBC1D15Q8TC07 691 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 RAB40AQ8WXH6 277 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 NR1H4Q96RI1 486 aaPredicted RBP6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 NRIP2Q9BQI9 281 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 EXOSC4Q9NPD3 245 aaKnown RBP6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 MTCH1Q9NZJ7 389 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 GSTK1Q9Y2Q3 226 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 AUP1Q9Y679 476 aa6.78□□□□□ -1.32
TM4SF1-204ENST00000493348 TRBV5-7A0A0A0MS05 114 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 IGHV2-70DA0A0C4DH43 119 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 H3BUI4 141 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 DEGS1O15121 323 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 GPX5O75715 221 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 HAND1O96004 215 aa6.77□□□□□ -1.33
TM4SF1-204ENST00000493348 PPIAL4GP0DN37 164 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms