RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 PAICSP22234 425 aaKnown RBP7.48□□□□□ -1.21
HDAC3-212ENST00000492407 ANOS1P23352 680 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 KIR2DS4P43632 304 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 OR3A3P47888 321 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 CCR9P51686 369 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 ZNF121P58317 390 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-212ENST00000492407 HOXA4Q00056 320 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-212ENST00000492407 DBPQ10586 325 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-212ENST00000492407 KCTD21Q4G0X4 260 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 KLHL12Q53G59 568 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 OR2T5Q6IEZ7 315 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 LYPD4Q6UWN0 246 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 LIAT1Q6ZQX7 453 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 FAM57BQ71RH2 274 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-212ENST00000492407 TIGD4Q8IY51 512 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 FAM216BQ8N7L0 139 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 AQP11Q8NBQ7 271 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 OR6K6Q8NGW6 343 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 OR2T29Q8NH02 315 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 OR4Q3Q8NH05 313 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 PGAM5Q96HS1 289 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 HIST1H2AAQ96QV6 131 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 C12orf57Q99622 126 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 MEGF9Q9H1U4 602 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 RANBP3Q9H6Z4 567 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-212ENST00000492407 DCLRE1BQ9H816 532 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 REEP1Q9H902 201 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 RAB18Q9NP72 206 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 RASL12Q9NYN1 266 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 TAS2R1Q9NYW7 299 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 SF3B6Q9Y3B4 125 aaKnown RBP7.48□□□□□ -1.21
HDAC3-212ENST00000492407 LRP12Q9Y561 859 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 MAB21L2Q9Y586 359 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 DOCK11Q5JSL3 2073 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 CMYA5Q8N3K9 4069 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 C5orf51A6NDU8 294 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 ANKRD61A6NGH8 418 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 PRODHO43272 600 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 DCTN3O75935 186 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 GYPBP06028 91 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 DCTDP32321 178 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 MSX2P35548 267 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-212ENST00000492407 RAB13P51153 203 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 TAS2R60P59551 318 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 VAMP2P63027 116 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 POU4F2Q12837 409 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 PRDX4Q13162 271 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 IKZF1Q13422 519 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 HERPUD1Q15011 391 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 SLC35D3Q5M8T2 416 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 ZBTB37Q5TC79 503 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 LCN1P1Q5VSP4 162 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 STEAP3Q658P3 488 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 LCN8Q6JVE9 175 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 DEFB107AQ8IZN7 70 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 OR6N2Q8NGY6 317 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 OTOSQ8NHW6 89 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 SDSLQ96GA7 329 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 RNF170Q96K19 258 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 GAFA1Q96PS6 74 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 PKP2Q99959 881 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 CDCA4Q9BXL8 241 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 SIRT7Q9NRC8 400 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 ZNF319Q9P2F9 582 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 NLKQ9UBE8 527 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 SLC25A10Q9UBX3 287 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-212ENST00000492407 GLS2Q9UI32 602 aa7.47□□□□□ -1.21
HDAC3-212ENST00000492407 NOTCH1P46531 2555 aa7.46□□□□□ -1.21
HDAC3-212ENST00000492407 A0A1B0GW55 424 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 hCG_1809904A0A1W2PP81 198 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 A0A1W2PPE2 198 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 A0A1W2PR64 198 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 A0A1W2PRV1 198 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 TCRBV5S2A0A599 114 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 MEIOCA2RUB1 952 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 OR5B21A6NL26 309 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 OR2AT4A6NND4 320 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 ZNF850A8MQ14 1090 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 LINC00587B1AMM8 73 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 ITGB1BP1O14713 200 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 APOA1P02647 267 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 CSF1P09603 554 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 DUX4L2P0CJ85 424 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 DUX4L3P0CJ86 424 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 DUX4L4P0CJ87 422 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 DUX4L5P0CJ88 424 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 DUX4L6P0CJ89 424 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 DUX4L7P0CJ90 424 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 GABRA5P31644 462 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 RCVRNP35243 200 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 SAA4P35542 130 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 MAP2K3P46734 347 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 RPL5P46777 297 aaKnown RBP7.46□□□□□ -1.22
HDAC3-212ENST00000492407 PSMA6P60900 246 aaKnown RBP7.46□□□□□ -1.22
HDAC3-212ENST00000492407 GNG3P63215 75 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 SSX2Q16385 188 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 DGUOKQ16854 277 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 CEACAM21Q3KPI0 293 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 FBLN7Q53RD9 439 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms