RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 RBP2P50120 134 aa13.58□□□□□ -0.24
PDLIM2-217ENST00000491330 ZNF85Q03923 595 aa13.58□□□□□ -0.24
PDLIM2-217ENST00000491330 SSX6Q7RTT6 188 aa13.58□□□□□ -0.24
PDLIM2-217ENST00000491330 Q8N7P7 452 aa13.58□□□□□ -0.24
PDLIM2-217ENST00000491330 DNAAF1Q8NEP3 725 aa13.58□□□□□ -0.24
PDLIM2-217ENST00000491330 CHST5Q9GZS9 411 aa13.58□□□□□ -0.24
PDLIM2-217ENST00000491330 FGF23Q9GZV9 251 aaPredicted RBP13.58□□□□□ -0.24
PDLIM2-217ENST00000491330 VCXQ9H320 206 aa13.58□□□□□ -0.24
PDLIM2-217ENST00000491330 ZNF222Q9UK12 451 aa13.58□□□□□ -0.24
PDLIM2-217ENST00000491330 HSPE1-MOB4S4R3N1 261 aa13.58□□□□□ -0.24
PDLIM2-217ENST00000491330 FUOMA2VDF0 154 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 A6NIN4 97 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 FCN3O75636 299 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 APOL3O95236 402 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 IGHA1P01876 353 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 TK1P04183 234 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 DBTP11182 482 aaKnown RBP13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 MTCP1P56278 107 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 ZNF91Q05481 1191 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 GABPB1Q06547 395 aaPredicted RBP13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 GALEQ14376 348 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 TREML4Q6UXN2 200 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 ANGPTL5Q86XS5 388 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 BEND2Q8NDZ0 799 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 OR13D1Q8NGV5 346 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 CPNE2Q96FN4 548 aaPredicted RBP13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 ZNF488Q96MN9 340 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 JAM3Q9BX67 310 aa13.57□□□□□ -0.24
PDLIM2-217ENST00000491330 LOC107986453A0A1B0GWG9 222 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 hADV38S2A0JD32 116 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 PEX2P28328 305 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 EDDM3BP56851 147 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 MED21Q13503 144 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 AANATQ16613 207 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 TP53I3Q53FA7 332 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 TMEM200BQ69YZ2 307 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 C11orf88Q6PI97 169 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 SLC25A26Q70HW3 274 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 CD177Q8N6Q3 437 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 ZNF676Q8N7Q3 588 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 OR2G2Q8NGZ5 317 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 EMG1Q92979 244 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 UBE2FQ969M7 185 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 SPSB1Q96BD6 273 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 LGALS12Q96DT0 336 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 DCLRE1BQ9H816 532 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 ELL3Q9HB65 397 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 TCF7L1Q9HCS4 588 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 ABCB10Q9NRK6 738 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 C19orf12Q9NSK7 152 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 HHLA2Q9UM44 414 aa13.56□□□□□ -0.24
PDLIM2-217ENST00000491330 K7N7A8 449 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 CASQ2O14958 399 aaPredicted RBP13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 TFF1P04155 84 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 CCDC159P0C7I6 412 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 MEF2CQ06413 473 aaPredicted RBP13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 KLRD1Q13241 179 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 RCN1Q15293 331 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 LIAT1Q6ZQX7 453 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 LHFPL2Q6ZUX7 228 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 OR4M1Q8NGD0 313 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 OR4C13Q8NGP0 309 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 WFDC12Q8WWY7 111 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 TNFRSF14Q92956 283 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 FOXRED1Q96CU9 486 aaPredicted RBP13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 SNX22Q96L94 193 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 SSX3Q99909 188 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 COMMD4Q9H0A8 199 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 HES4Q9HCC6 221 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 NBEAL1Q6ZS30 2694 aa13.55□□□□□ -0.24
PDLIM2-217ENST00000491330 H3BSH0 61 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 J3QLW9 94 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 MAGEB3O15480 346 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 RBP4P02753 201 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 ZNF19P17023 458 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 GABRR1P24046 479 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 DCKP27707 260 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 POU3F4P49335 361 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 COL10A1Q03692 680 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 UBE2V2Q15819 145 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 LRRC75BQ2VPJ9 315 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 ZNF691Q5VV52 312 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 UTS2BQ765I0 119 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 DHRSXQ8N5I4 330 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 OR13C3Q8NGS6 347 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 LINC01006Q8NI28 216 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 SLAMF9Q96A28 289 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 ALG8Q9BVK2 526 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 PPA2Q9H2U2 334 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 C16orf95Q9H693 158 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 RHOFQ9HBH0 211 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 PITPNC1Q9UKF7 332 aa13.54□□□□□ -0.24
PDLIM2-217ENST00000491330 TMEM212A6NML5 194 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 H3BUX3 64 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 SH2D1BO14796 132 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 INMTO95050 263 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 ZNF728P0DKX0 622 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 PIPP12273 146 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 ATF1P18846 271 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 COX7A1P24310 79 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms