RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 FBXW5Q969U6 566 aa11.85□□□□□ -0.51
SMPD4-219ENST00000491128 OR51I2Q9H344 312 aa11.85□□□□□ -0.51
SMPD4-219ENST00000491128 ZNF701Q9NV72 531 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-219ENST00000491128 ABCA4P78363 2273 aa11.85□□□□□ -0.51
SMPD4-219ENST00000491128 IGKV1D-8A0A087WSZ0 117 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 CYB5AP00167 134 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 PRB1P04280 392 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 KCNJ8Q15842 424 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 SCGB2B2Q4G0G5 96 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 STEAP1BQ6NZ63 245 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 ASCL4Q6XD76 172 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 ZNF782Q6ZMW2 699 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-219ENST00000491128 C15orf40Q8WUR7 153 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 HPS1Q92902 700 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 SNAPC3Q92966 411 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 CNTNAP3BQ96NU0 1288 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 CNTNAP3Q9BZ76 1288 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 WDR13Q9H1Z4 485 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 DPAGT1Q9H3H5 408 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 IFT46Q9NQC8 304 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 ELOVL5Q9NYP7 299 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 FLNCQ14315 2725 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 ANKHD1Q8IWZ3 2542 aaKnown RBP11.84□□□□□ -0.51
SMPD4-219ENST00000491128 DCHS2Q6V1P9 2916 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 A0A0A6YYH2 397 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 A6NJ64 397 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 TRAPPC2LH3BP13 241 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 WNT9BO14905 357 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 ECDO95905 644 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-219ENST00000491128 HRH1P35367 487 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 DYRK1AQ13627 763 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 TMEM211Q6ICI0 200 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 PXT1Q8NFP0 134 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 TMEM171Q8WVE6 324 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 DACT3Q96B18 629 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-219ENST00000491128 CPNE2Q96FN4 548 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-219ENST00000491128 TECTBQ96PL2 329 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 TM2D1Q9BX74 207 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 MRPL37Q9BZE1 423 aaKnown RBP11.84□□□□□ -0.51
SMPD4-219ENST00000491128 AK3Q9UIJ7 227 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 ALG5Q9Y673 324 aa11.84□□□□□ -0.51
SMPD4-219ENST00000491128 A6NLC8 198 aa11.83□□□□□ -0.52
SMPD4-219ENST00000491128 ZNF736B4DX44 427 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-219ENST00000491128 HS3ST1O14792 307 aa11.83□□□□□ -0.52
SMPD4-219ENST00000491128 SPRY3O43610 288 aa11.83□□□□□ -0.52
SMPD4-219ENST00000491128 RAB3DO95716 219 aa11.83□□□□□ -0.52
SMPD4-219ENST00000491128 GNLYP22749 145 aa11.83□□□□□ -0.52
SMPD4-219ENST00000491128 CEBPDP49716 269 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-219ENST00000491128 RBM11P57052 281 aaKnown RBP11.83□□□□□ -0.52
SMPD4-219ENST00000491128 CDH24Q86UP0 819 aa11.83□□□□□ -0.52
SMPD4-219ENST00000491128 MICU1Q9BPX6 476 aa11.83□□□□□ -0.52
SMPD4-219ENST00000491128 RTL8AQ9BWD3 113 aa11.83□□□□□ -0.52
SMPD4-219ENST00000491128 ZSCAN5BA6NJL1 495 aa11.83□□□□□ -0.52
SMPD4-219ENST00000491128 SDCBPO00560 298 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-219ENST00000491128 ARPC1BO15143 372 aaKnown RBP11.83□□□□□ -0.52
SMPD4-219ENST00000491128 AMY2AP04746 511 aa11.83□□□□□ -0.52
SMPD4-219ENST00000491128 CSF1P09603 554 aa11.83□□□□□ -0.52
SMPD4-219ENST00000491128 RCVRNP35243 200 aa11.83□□□□□ -0.52
SMPD4-219ENST00000491128 AP3S2P59780 193 aa11.83□□□□□ -0.52
SMPD4-219ENST00000491128 NKX6-1P78426 367 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-219ENST00000491128 MARVELD1Q9BSK0 173 aa11.83□□□□□ -0.52
SMPD4-219ENST00000491128 PYCARD-AS1I3L0S3 204 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 J3QW42 95 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 MELTFP08582 738 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 ANXA7P20073 488 aaKnown RBP11.82□□□□□ -0.52
SMPD4-219ENST00000491128 ZNF573Q86YE8 665 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 MKXQ8IYA7 352 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 CA5BP1Q8WTZ4 195 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 ST8SIA4Q92187 359 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 SLC6A7Q99884 636 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 C20orf85Q9H1P6 137 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 MEX3AA1L020 520 aaKnown RBP11.82□□□□□ -0.52
SMPD4-219ENST00000491128 ZNF780AO75290 641 aaPredicted RBP11.82□□□□□ -0.52
SMPD4-219ENST00000491128 AKAIN1P0CW23 69 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 ACTBP60709 375 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 ACTG1P63261 375 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 IKZF1Q13422 519 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 TMEM108Q6UXF1 575 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 C17orf107Q6ZR85 190 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 FAM169BQ8N8A8 192 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 BOLLQ8N9W6 283 aaKnown RBP11.82□□□□□ -0.52
SMPD4-219ENST00000491128 RDH5Q92781 318 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 EMG1Q92979 244 aaKnown RBP11.82□□□□□ -0.52
SMPD4-219ENST00000491128 CHST6Q9GZX3 395 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 COQ3Q9NZJ6 369 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 RABL2AQ9UBK7 228 aaPredicted RBP11.82□□□□□ -0.52
SMPD4-219ENST00000491128 RABL2BQ9UNT1 228 aa11.82□□□□□ -0.52
SMPD4-219ENST00000491128 hCG_1807616A0A1W2PRN6 198 aa11.81□□□□□ -0.52
SMPD4-219ENST00000491128 TMEM8BA6NDV4 472 aa11.81□□□□□ -0.52
SMPD4-219ENST00000491128 OR5B21A6NL26 309 aa11.81□□□□□ -0.52
SMPD4-219ENST00000491128 PLAUP00749 431 aa11.81□□□□□ -0.52
SMPD4-219ENST00000491128 SFTPCP11686 197 aa11.81□□□□□ -0.52
SMPD4-219ENST00000491128 CHATP28329 748 aa11.81□□□□□ -0.52
SMPD4-219ENST00000491128 MICBQ29980 383 aa11.81□□□□□ -0.52
SMPD4-219ENST00000491128 MBNL2Q5VZF2 373 aaKnown RBP11.81□□□□□ -0.52
SMPD4-219ENST00000491128 UNQ6126/PRO20091Q6UXV3 157 aa11.81□□□□□ -0.52
SMPD4-219ENST00000491128 OR5T2Q8NGG2 359 aa11.81□□□□□ -0.52
SMPD4-219ENST00000491128 GINS4Q9BRT9 223 aa11.81□□□□□ -0.52
SMPD4-219ENST00000491128 ZNF442Q9H7R0 627 aa11.81□□□□□ -0.52
SMPD4-219ENST00000491128 SCPEP1Q9HB40 452 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms