RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 RAB8BQ92930 207 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 TLCD1Q96CP7 247 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 DNAJC19Q96DA6 116 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 TMA16Q96EY4 203 aaKnown RBP2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 PRAP1Q96NZ9 151 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 SH3GL3Q99963 347 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 C20orf144Q9BQM9 153 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 CDCA4Q9BXL8 241 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 LHX9Q9NQ69 397 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 FAM206AQ9NX38 181 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 ST3GAL6Q9Y274 331 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 FARSAQ9Y285 508 aaKnown RBP2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 SNX10Q9Y5X0 201 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 ABCC11Q96J66 1382 aa2.97□□□□□ -1.93
HMGB1P38-201ENST00000490557 IGKV6-21A0A0C4DH24 114 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 TINCRA0A1B0GVN0 87 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 DAPL1A0PJW8 107 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 ARGFXA6NJG6 315 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 KCNK1O00180 336 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 SYNGR1O43759 233 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 UGT2B11O75310 529 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 ENTPD6O75354 484 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 RDH16O75452 317 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 GATBO75879 557 aaKnown RBP2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 DCTN3O75935 186 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 GLSO94925 669 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 IFNA14P01570 189 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 IFNA16P05015 189 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 MYL9P24844 172 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 RPS12P25398 132 aaKnown RBP2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 PSMA1P25786 263 aaKnown RBP2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 PFN2P35080 140 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 MAGEA12P43365 314 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 PPICP45877 212 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 PSMD7P51665 324 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 IL5RAQ01344 420 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 PRPSAP1Q14558 356 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 CEACAM21Q3KPI0 293 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 SYT6Q5T7P8 510 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 HACD4Q5VWC8 232 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 CST9Q5W186 159 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 FAM71E1Q6IPT2 247 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 CASP12Q6UXS9 341 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 SMIM15Q7Z3B0 74 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 TAC4Q86UU9 113 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 PCP2Q8IVA1 136 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 GID4Q8IVV7 300 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 CCNYL1Q8N7R7 359 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 ZFP41Q8N8Y5 198 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 CHST4Q8NCG5 386 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 FAM172AQ8WUF8 416 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 SNF8Q96H20 258 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 BMFQ96LC9 184 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 PRRT1Q99946 306 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 ULBP1Q9BZM6 244 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 SLC19A3Q9BZV2 496 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 ARV1Q9H2C2 271 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 OR51B5Q9H339 312 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 SLCO1B3Q9NPD5 702 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 GID8Q9NWU2 228 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 TAS2R13Q9NYV9 303 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 COMMD9Q9P000 198 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 OR12D3Q9UGF7 316 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 RAB22AQ9UL26 194 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 SLC7A11Q9UPY5 501 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 MMACHCQ9Y4U1 282 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 MRPS18BQ9Y676 258 aaKnown RBP2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 KCNE3Q9Y6H6 103 aa2.96□□□□□ -1.94
HMGB1P38-201ENST00000490557 TRAV8-4A0A0B4J246 113 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 LOC105371267A0A1B0GV96 52 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 H7C1H1 209 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 ANGPTL7O43827 346 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 CTNSO60931 367 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 UPK1BO75841 260 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 WISP3O95389 354 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 PTHP01270 115 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 P01737 135 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 EIF4EP06730 217 aaKnown RBP2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 SLC35G6P0C7Q6 338 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 THRAP10827 490 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 ME2P23368 584 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 CFL1P23528 166 aaKnown RBP2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 IFNGR2P38484 337 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 KRTAP10-8P60410 259 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 ARG2P78540 354 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 TAF1AQ15573 450 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 GUCA2BQ16661 112 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 SLC25A35Q3KQZ1 300 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 ANKRD22Q5VYY1 191 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 FAM131AQ6UXB0 335 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 OAFQ86UD1 273 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 ZADH2Q8N4Q0 377 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 OR10W1Q8NGF6 305 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 NT5CQ8TCD5 201 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 ACTRT1Q8TDG2 376 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 NEK7Q8TDX7 302 aa2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 GEMIN6Q8WXD5 167 aaKnown RBP2.95□□□□□ -1.94
HMGB1P38-201ENST00000490557 NTAN1Q96AB6 310 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms