RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 OR5H6Q8NGV6 325 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 LRRC29Q8WV35 223 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 RAB40AQ8WXH6 277 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 RDH5Q92781 318 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 Q96M66 194 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 NUDT16L1Q9BRJ7 211 aaKnown RBP11.25□□□□□ -0.61
TRAIP-210ENST00000489948 KCNK15Q9H427 330 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 SEBOXQ9HB31 216 aaPredicted RBP11.25□□□□□ -0.61
TRAIP-210ENST00000489948 HMG20AQ9NP66 347 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 TMEM106BQ9NUM4 274 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 RBFOX1Q9NWB1 397 aaKnown RBP11.25□□□□□ -0.61
TRAIP-210ENST00000489948 RHBDL2Q9NX52 303 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 RAB22AQ9UL26 194 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 EDARQ9UNE0 448 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 ING4Q9UNL4 249 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 PLEKHA6Q9Y2H5 1048 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 PEX16Q9Y5Y5 336 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 TEX15Q9BXT5 2789 aa11.25□□□□□ -0.61
TRAIP-210ENST00000489948 USF3Q68DE3 2245 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 A0A0A6YYH2 397 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 IGHV3-64DA0A0J9YX35 117 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 A0A1W2PP11 408 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 A6NJ64 397 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 TMEM178BH3BS89 294 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.24□□□□□ -0.61
TRAIP-210ENST00000489948 CRTAPO75718 401 aaPredicted RBP11.24□□□□□ -0.61
TRAIP-210ENST00000489948 NXPH2O95156 264 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 IRF2P14316 349 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 CPT2P23786 658 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 RBM11P57052 281 aaKnown RBP11.24□□□□□ -0.61
TRAIP-210ENST00000489948 ZNF146Q15072 292 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 TEX36Q5VZQ5 186 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 FIP1L1Q6UN15 594 aaKnown RBP11.24□□□□□ -0.61
TRAIP-210ENST00000489948 FAM58AQ8N1B3 248 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 OSR2Q8N2R0 312 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 SAMD12Q8N8I0 201 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 EMG1Q92979 244 aaKnown RBP11.24□□□□□ -0.61
TRAIP-210ENST00000489948 URM1Q9BTM9 101 aaKnown RBP11.24□□□□□ -0.61
TRAIP-210ENST00000489948 GSX2Q9BZM3 304 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 C6orf62Q9GZU0 229 aaPredicted RBP11.24□□□□□ -0.61
TRAIP-210ENST00000489948 LPAR5Q9H1C0 372 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 IFT22Q9H7X7 185 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 ELL3Q9HB65 397 aaPredicted RBP11.24□□□□□ -0.61
TRAIP-210ENST00000489948 BARX1Q9HBU1 254 aaPredicted RBP11.24□□□□□ -0.61
TRAIP-210ENST00000489948 COMMD3Q9UBI1 195 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 ADAM30Q9UKF2 790 aa11.24□□□□□ -0.61
TRAIP-210ENST00000489948 POLQO75417 2590 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 AKAP9Q99996 3911 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 F8VVB4 439 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 F8VWA3 439 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 HTR3BO95264 441 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 MPIG6BO95866 241 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 KNG1P01042 644 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 DAOP14920 347 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 EGR1P18146 543 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 GLRA1P23415 457 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 ART1P52961 327 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 MPV17LQ2QL34 196 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 HFEQ30201 348 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 OR10K2Q6IF99 312 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 RAB12Q6IQ22 244 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 ACP7Q6ZNF0 438 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 LAX1Q8IWV1 398 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 FAM89BQ8N5H3 189 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 OR10K1Q8NGX5 313 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 NINJ1Q92982 152 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 YIPF5Q969M3 257 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 ZNF488Q96MN9 340 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 MIXL1Q9H2W2 232 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 CHODLQ9H9P2 273 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 CACNG2Q9Y698 323 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 ITPR2Q14571 2701 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 MYO9AB2RTY4 2548 aa11.23□□□□□ -0.61
TRAIP-210ENST00000489948 METTL21EPA6NDL7 271 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 FOXI3A8MTJ6 420 aaPredicted RBP11.22□□□□□ -0.61
TRAIP-210ENST00000489948 CLDN25C9JDP6 229 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 H3BUI4 141 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 HPGDSO60760 199 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 TPPPO94811 219 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 IGHV4-39P01824 125 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 MUC1P15941 1255 aaPredicted RBP11.22□□□□□ -0.61
TRAIP-210ENST00000489948 PRKACAP17612 351 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 S100A5P33763 92 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 ETV6P41212 452 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 EFNB2P52799 333 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 KRTAP10-9P60411 292 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 PLA2G7Q13093 441 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 TGIF2LYQ8IUE0 185 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 OR6Q1Q8NGQ2 317 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 FAM46BQ96A09 425 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 MBD6Q96DN6 1003 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 CSMD1Q96PZ7 3565 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 SELENOIQ9C0D9 397 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 BEX4Q9NWD9 120 aaPredicted RBP11.22□□□□□ -0.61
TRAIP-210ENST00000489948 RCC2Q9P258 522 aaKnown RBP11.22□□□□□ -0.61
TRAIP-210ENST00000489948 ST3GAL6Q9Y274 331 aa11.22□□□□□ -0.61
TRAIP-210ENST00000489948 A0A0A6YYD4 124 aa11.21□□□□□ -0.61
TRAIP-210ENST00000489948 OOEPA6NGQ2 149 aa11.21□□□□□ -0.61
TRAIP-210ENST00000489948 LGALS8O00214 317 aa11.21□□□□□ -0.61
TRAIP-210ENST00000489948 CTDSP2O14595 271 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms