RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 PKIBQ9C010 78 aa12.74□□□□□ -0.37
PLOD3-216ENST00000489927 MOB1AQ9H8S9 216 aa12.74□□□□□ -0.37
PLOD3-216ENST00000489927 MTCH1Q9NZJ7 389 aa12.74□□□□□ -0.37
PLOD3-216ENST00000489927 OR52A1Q9UKL2 312 aa12.74□□□□□ -0.37
PLOD3-216ENST00000489927 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.74□□□□□ -0.37
PLOD3-216ENST00000489927 R4GMQ9 66 aa12.74□□□□□ -0.37
PLOD3-216ENST00000489927 COL7A1Q02388 2944 aa12.73□□□□□ -0.37
PLOD3-216ENST00000489927 FAM230AA0A1W2PPH8 454 aa12.73□□□□□ -0.37
PLOD3-216ENST00000489927 ALDOBP05062 364 aa12.73□□□□□ -0.37
PLOD3-216ENST00000489927 CHRM2P08172 466 aa12.73□□□□□ -0.37
PLOD3-216ENST00000489927 ANXA8P13928 327 aa12.73□□□□□ -0.37
PLOD3-216ENST00000489927 CXCR4P61073 352 aa12.73□□□□□ -0.37
PLOD3-216ENST00000489927 ACTA2P62736 377 aa12.73□□□□□ -0.37
PLOD3-216ENST00000489927 ACTG2P63267 376 aa12.73□□□□□ -0.37
PLOD3-216ENST00000489927 ACTC1P68032 377 aa12.73□□□□□ -0.37
PLOD3-216ENST00000489927 ACTA1P68133 377 aa12.73□□□□□ -0.37
PLOD3-216ENST00000489927 BCDIN3DQ7Z5W3 292 aaKnown RBP12.73□□□□□ -0.37
PLOD3-216ENST00000489927 OR8H2Q8N162 312 aa12.73□□□□□ -0.37
PLOD3-216ENST00000489927 CADM1Q9BY67 442 aaKnown RBP12.73□□□□□ -0.37
PLOD3-216ENST00000489927 DNAJB9Q9UBS3 223 aa12.73□□□□□ -0.37
PLOD3-216ENST00000489927 TMEM82A0PJX8 343 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 DHRS7CA6NNS2 312 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 FAM90A22PA8MWA6 464 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 PRKYO43930 277 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 PF4V1P10720 104 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 MEF2CQ06413 473 aaPredicted RBP12.72□□□□□ -0.37
PLOD3-216ENST00000489927 EDDM3AQ14507 147 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 TCTEX1D4Q5JR98 221 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 VAX1Q5SQQ9 334 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 MINOS1Q5TGZ0 78 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 Q6ZSR3 168 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 ZNF676Q8N7Q3 588 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 TPRX1Q8N7U7 411 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 NDNFQ8TB73 568 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 CEP19Q96LK0 163 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 MRM2Q9UI43 246 aaKnown RBP12.72□□□□□ -0.37
PLOD3-216ENST00000489927 SNX5Q9Y5X3 404 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 MINOS1-NBL1R4GNA1 71 aa12.72□□□□□ -0.37
PLOD3-216ENST00000489927 IGKV1-27A0A075B6S5 117 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 IGHV2-26A0A0B4J1V2 119 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 hADV38S2A0JD32 116 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 AQP12BA6NM10 295 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 K7EIL1 84 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 DNAJC8O75937 253 aaPredicted RBP12.71□□□□□ -0.37
PLOD3-216ENST00000489927 INMTO95050 263 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 T-ENOLP0DO92 83 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 CCL1P22362 96 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 CALB2P22676 271 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 AZGP1P25311 298 aaKnown RBP12.71□□□□□ -0.37
PLOD3-216ENST00000489927 CRISP1P54107 249 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 AQP12AQ8IXF9 295 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 SLC35F2Q8IXU6 374 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 SLAMF9Q96A28 289 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 SNX22Q96L94 193 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 TMEM133Q9H2Q1 129 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 ADGRL4Q9HBW9 690 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 SLC7A11Q9UPY5 501 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 SESN1Q9Y6P5 492 aa12.71□□□□□ -0.37
PLOD3-216ENST00000489927 DNAH9Q9NYC9 4486 aa12.71□□□□□ -0.38
PLOD3-216ENST00000489927 H3BSH0 61 aa12.7□□□□□ -0.38
PLOD3-216ENST00000489927 M0R129 80 aa12.7□□□□□ -0.38
PLOD3-216ENST00000489927 ATP8B1O43520 1251 aa12.7□□□□□ -0.38
PLOD3-216ENST00000489927 ACTR3P61158 418 aa12.7□□□□□ -0.38
PLOD3-216ENST00000489927 PTGES3Q15185 160 aaKnown RBP12.7□□□□□ -0.38
PLOD3-216ENST00000489927 UBE2V2Q15819 145 aa12.7□□□□□ -0.38
PLOD3-216ENST00000489927 ODF4Q2M2E3 257 aa12.7□□□□□ -0.38
PLOD3-216ENST00000489927 CCDC121Q6ZUS5 278 aa12.7□□□□□ -0.38
PLOD3-216ENST00000489927 MEPCEQ7L2J0 689 aaKnown RBP12.7□□□□□ -0.38
PLOD3-216ENST00000489927 CENPVQ7Z7K6 275 aaPredicted RBP12.7□□□□□ -0.38
PLOD3-216ENST00000489927 OR52N4Q8NGI2 321 aa12.7□□□□□ -0.38
PLOD3-216ENST00000489927 MNTQ99583 582 aa12.7□□□□□ -0.38
PLOD3-216ENST00000489927 CLEC7AQ9BXN2 247 aa12.7□□□□□ -0.38
PLOD3-216ENST00000489927 CHST6Q9GZX3 395 aa12.7□□□□□ -0.38
PLOD3-216ENST00000489927 PLEKHA1Q9HB21 404 aa12.7□□□□□ -0.38
PLOD3-216ENST00000489927 PAPOLBQ9NRJ5 636 aaKnown RBP12.7□□□□□ -0.38
PLOD3-216ENST00000489927 IL36RNQ9UBH0 155 aa12.7□□□□□ -0.38
PLOD3-216ENST00000489927 LINC00312Q9Y6C7 94 aa12.7□□□□□ -0.38
PLOD3-216ENST00000489927 TCRBV4S1A1TA0A5B7 111 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 H3BUI4 141 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 MMP23AO75900 390 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 RPP14O95059 124 aaKnown RBP12.69□□□□□ -0.38
PLOD3-216ENST00000489927 HAND1O96004 215 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 IGHA1P01876 353 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 PF4P02776 101 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 HOXB6P17509 224 aaKnown RBP12.69□□□□□ -0.38
PLOD3-216ENST00000489927 CD24P25063 80 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 HTR1DP28221 377 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 CBX1P83916 185 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 GRK1Q15835 563 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 C11orf87Q6NUJ2 197 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 SLC25A26Q70HW3 274 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 EGFL6Q8IUX8 553 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 OR4P4Q8NGL7 312 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 EMG1Q92979 244 aaKnown RBP12.69□□□□□ -0.38
PLOD3-216ENST00000489927 THTPAQ9BU02 230 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 CLN6Q9NWW5 311 aa12.69□□□□□ -0.38
PLOD3-216ENST00000489927 ZNF670-ZNF695F2Z2N8 137 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 SYT7O43581 403 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 PSPNO60542 156 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 FKBP6O75344 327 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms